We tested whether the plant response to an environmental factor could be affected by the context of another factor by using shade avoidance response at different temperatures. Depleting the red light (R; λ max = 660 nm) and/or enriching the far-red light (FR; λ max = 730 nm) results in a low R:FR ratio in the environment, which induces shade avoidance response such as elongation of petioles and reduction of plant pigments. On the other hand, warmer environmental temperature is known to mimic shade avoidance response under normal light condition, suggesting a potential crosstalk between the temperature and the light quality signals. Therefore, we investigated the patterns of gene expression responses to low R:FR ratio in different temperature contexts (22°C and 26°C) through microarray analyses. Similar, yet distinct patterns between the two responses were implicated by the levels of correlation in the commonly affected MapMan bins. However, the induction levels of typical shade genes such as ATHB2, IAA29, IAA19, HFR1, YUC8, and FT were very similar at both temperatures. Moreover, petiole length, chlorophylls, carotenoids, and anthocyanins contents did not support any statistically significant interaction between the light quality and the high temperature responses despite the obvious independent effect of each signal, which suggests cumulative effects of two independent responses. Nevertheless, other types of low R: FR-responsive genes with differential expression patterns at different temperatures were identified. They are overrepresented in secondary metabolism, lipid transport, oxidative stress, jasmonic acid, ethylene, light, pathogen defense responses, and extracellular region.
Plant development is greatly affected by environmental factors such as light, temperature, and water. Those factors are not only important physiological components to support normal growth of a plant, but are also important signals for making decisions to turn on/off certain pathways and responses. Therefore, many studies so far have produced significant amount of information on the regulatory roles of those factors during plant development. Among those factors, light is an important factor that affects not only photosynthesis but also various stages of plant development from seed germination to morphogenesis and to flowering. All those aspects of plant development are regulated by light intensity, quality, and directionality. Light quality that can be measured by the ratio of red (R; λmax = 660 nm) to far-red (FR; λmax = 730 nm) light irradiances is an indirect measure of plant population density in surrounding area [
The change in R:FR ratio is sensed by the photoreceptor phytochromes. Particularly, phytochrome B (PHYB) is known to play a major role in shade avoidance response in Arabidopsis [
On the other hand, it is known that warmer environmental temperature mimics shade avoidance response such as elongational growth under non-shade condition [
The phenotypic similarity between the shade avoidance and warm temperature responses led to a notion of signal integration between the two. So far, one of the integration mechanisms seems to occur through the phytohormone auxin, which is required for the elongational growth during shade avoidance response as well as high temperature-induced cell elongation [
Arabidopsis thaliana ecotype Columbia was used for all experiments. Surface sterilized seeds were sown on 0.8% agar plates containing full strength Murashige and Skoog salts (pH 5.7) supplemented with 1% sucrose and kept at 4˚C for 3 days for stratification. Seeds were germinated at 22˚C under cool white fluorescent light (80 μmol/m2sec) and grown for 10 days under the same condition. Then plants were treated with either one of the following four conditions for 24 hours before the harvest for total RNA extraction. The four conditions were created by combining a light condition and a temperature condition: either with (W + FR) or without (WL) supplemental far-red light (740 nm LED, 6 μmol/m2sec) at either 22˚C or 26˚C. Those conditions were named as W+FR22˚C, WL22˚C, W+FR26˚C and WL26˚C. The R:FR ratio was ca. 0.6 with the far-red light supplementation and ca. 4 without the supplementation. For the phenotypic study, seven-day-old seedlings grown under the above mentioned standard condition were treated with either one of the six conditions indicated in the result for additional 7 days before the analysis.
The whole seedlings were instantly frozen by pouring liquid nitrogen directly on the plate containing agar medium, and the areal part of the seedlings (approximately 100 mg) were collected by scraping with a pre-chilled spatula. The total RNA samples were prepared using TRI Reagent TM (SIGMA, St Louis, MO, USA) by following the manufacturer’s guide. The total RNAs were treated with DNase I and purified using RNeasy Mini Spin Columns (QIAGEN, Hilden, Germany). Three independent experiments were done for three replicates. The microarray experiments were carried out using Affymetrix ATH1 gene expression array by the Heflin Center for Genomic Sciences (University of Alabama, Birmingham, AL). The raw data is available at GEO in NCBI (GSE64197).
The raw data were RMA-normalized by Bioconductor Affy package and MAS5 detection calls (Present/Mar- ginal/Absent) were determined independently to select the genes with significant signal intensity. After eliminating all genes that had more than three A (Absent) calls for inconsistent signal intensity among the 12 chip data, 15,128 genes were recovered. These genes were used in MapMan analysis to identify significantly responded functional gene clusters [
Chlorophylls and carotenoids were extracted by grinding 100 mg of the areal part of plants in cold 80% acetone with a mortar and a pestle. After 1 hour of incubation on ice in a dark place, the debris was pelleted by centrifugation. The absorbance (wavelength at 663.2 nm, 646.8 nm and 470 nm) of the supernatant was measured by using a spectrophotometer, and the data was analyzed as described previously [
Anthocyanin was extracted by grinding 100 mg of the areal part of plants in 1% HCl in methanol. After 1 hour of incubation on ice in a dark place, the debris was pelleted by centrifugation. The absorbance (wavelength at 530 nm and 657 nm) of the supernatant was measured by using a spectrophotometer, and the data was analyzed as described previously [
For the petiole length analysis, the longest petiole of each plant was collected and photographed. The lengths of petioles in the digital images were determined by using NIH Image J program [
To compare shade avoidance responses under different temperature contexts, we carried out a microarray gene expression study. Treatment conditions were generated by combining a temperature (22˚C or 26˚C) and a light condition (high or low R:FR ratio). The light environment with low R:FR ratio was produced by supplemental far-red LED lights (W+FR) in addition to regular white lights (WL). The combinations of them resulted in four different conditions (WL22˚C, W+FR22˚C, WL26˚C, and W+FR26˚C;
In all five treatment effects, there are not many genes that exhibited two fold (average log2Ratio = ±1) or higher expression change. Even when the cut-off value was set to 1.414 fold (average log2Ratio = ±0.5) or higher, the percentages of differentially expressed genes were as low as 0.72% (109 genes for <2> W+FR effect at 26˚C) and at most 2.01% (304 genes for <5> W+FR+26˚C effect) of 15,128 genes (Supplement
In order to obtain a bird’s eye view on the five different treatment “effects” mentioned above (
contrast with the absence of correlation between the high temperature only effect and the W+FR only effect (<3> vs. <1>;
To identify significantly affected functional gene clusters, we conducted MapMan analysis [
26˚C), confirming the limited similarity between the two W+FR treatment effects compared with the one between the two high temperature effects (
The common MapMan bins responded to W+FR under both temperature conditions are photosystems, tetrapyrrole synthesis, thioredoxin, AUX/IAA family, post-translational modification, and transport (
However, low R:FR condition affected more of regulation of transcription (bin #27.3) including AUX/IAA genes whereas high temperature condition affected more of auxin metabolism (bin #17.2). Therefore, we dissected the expression pattern within those notable bins by interrogating and visualizing individual gene expression in those clusters (
To have a closer look at the responsive genes, we identified 484 genes that exhibited statistically significant response to any of the above mentioned five treatment effects. In addition, 27 additional, non-overlapping genes were selected that could not pass the stringent statistical test but were consistently up- or down-regulated by at least 1.5-fold in all three replicates in any of the above five treatment effects (Materials and Methods). Those 511 responsive genes were clustered based on their expression patterns by hierarchical clustering (
Cluster | Category | GO# | Term | p-value | Adj. p-value (Benjamini) |
---|---|---|---|---|---|
a | BP | GO:0009733 | response to auxin stimulus | 6.27E−09 | 1.37E−06 |
BP | GO:0009734 | auxin mediated signaling pathway | 1.18E−05 | 1.28E−03 | |
BP | GO:0009725 | response to hormone stimulus | 7.46E−05 | 5.40E−03 | |
BP | GO:0009719 | response to endogenous stimulus | 1.33E−04 | 7.24E−03 | |
BP | GO:0010033 | response to organic substance | 6.24E−04 | 2.69E−02 | |
MF | GO:0003700 | transcription factor activity | 1.26E−04 | 9.67E−03 | |
MF | GO:0046983 | protein dimerization activity | 2.08E−04 | 7.98E−03 | |
MF | GO:0030528 | transcription regulator activity | 4.27E−04 | 1.09E−02 | |
c | BP | GO:0042546 | cell wall biogenesis | 1.95E−04 | 3.62E−02 |
BP | GO:0009834 | secondary cell wall biogenesis | 3.55E−04 | 3.30E−02 | |
i | BP | GO:0009408 | response to heat | 2.37E−06 | 6.86E−04 |
BP | GO:0010035 | response to inorganic substance | 7.29E−06 | 1.06E−03 | |
BP | GO:0006979 | response to oxidative stress | 9.91E−06 | 9.57E−04 | |
BP | GO:0000302 | response to reactive oxygen species | 6.20E−05 | 4.48E−03 | |
BP | GO:0009644 | response to high light intensity | 6.94E−05 | 4.02E−03 | |
BP | GO:0042542 | response to hydrogen peroxide | 2.66E−04 | 1.10E−02 | |
BP | GO:0009642 | response to light intensity | 5.17E−04 | 1.86E−02 | |
BP | GO:0009753 | response to jasmonic acid stimulus | 1.12E−04 | 5.41E−03 | |
k | BP | GO:0009628 | response to abiotic stimulus | 3.99E−05 | 6.56E−03 |
BP | GO:0006970 | response to osmotic stress | 8.83E−04 | 4.74E−02 |
condition (<3> and <4>) are related to heat stress, oxidative stress, high light intensity, and jasmonic acid (
In a number of previous reports important signature genes for shade avoidance response have been revealed. We looked specifically into some of those genes in our microarray data (
ID | Locus | Gene | <1> W+FR effect at 22˚C | <2> W+FR effect at 26˚C | <3> 26˚C effect under WL | <4> 26˚C effect under W+FR | <5> W+FR+26˚C effect | Shade induced expression (References) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
263739_at | AT2G21320 | BBX18 | 0.15 | ± | 0.19 | 0.19 | ± | 0.14 | 0.13 | ± | 0.06 | 0.17 | ± | 0.12 | 0.32 | ± | 0.08 | [ |
252917_at | AT4G38960 | BBX19 | −0.09 | ± | 0.09 | −0.08 | ± | 0.07 | −0.09 | ± | 0.17 | −0.09 | ± | 0.12 | −0.18 | ± | 0.21 | [ |
262975_at | AT1G75540 | BBX21 | 0.02 | ± | 0.13 | 0.00 | ± | 0.08 | −0.04 | ± | 0.09 | −0.06 | ± | 0.10 | −0.04 | ± | 0.06 | [ |
263128_at | AT1G78600 | BBX22 | −0.54 | ± | 0.29 | −0.16 | ± | 0.18 | −0.20 | ± | 0.10 | 0.18 | ± | 0.38 | −0.36 | ± | 0.22 | [ |
260956_at | AT1G06040 | BBX24 | −0.04 | ± | 0.10 | 0.05 | ± | 0.12 | 0.23 | ± | 0.22 | 0.31 | ± | 0.02 | 0.28 | ± | 0.11 | [ |
250569_at | AT5G08130 | BIM1 | 0.20 | ± | 0.19 | 0.03 | ± | 0.09 | 0.16 | ± | 0.22 | −0.01 | ± | 0.09 | 0.19 | ± | 0.20 | [ |
259417_at | AT1G02340 | HFR1 | 2.39 | ± | 0.19 | 2.48 | ± | 0.39 | 0.38 | ± | 0.21 | 0.47 | ± | 0.48 | 2.86 | ± | 0.29 | [ |
252890_at | AT4G39400 | BRI1 | 0.39 | ± | 0.17 | 0.22 | ± | 0.10 | 0.12 | ± | 0.09 | −0.05 | ± | 0.09 | 0.34 | ± | 0.13 | [ |
264508_at | AT1G09570 | PHYA | 0.10 | ± | 0.13 | −0.08 | ± | 0.11 | 0.23 | ± | 0.17 | 0.05 | ± | 0.08 | 0.15 | ± | 0.12 | [ |
248801_at | AT5G47370 | HAT2 | 0.61 | ± | 0.02 | 0.71 | ± | 0.20 | 0.22 | ± | 0.20 | 0.31 | ± | 0.39 | 0.92 | ± | 0.39 | [ |
263981_at | AT2G42870 | PAR1 | 0.07 | ± | 0.48 | 0.04 | ± | 0.16 | −0.05 | ± | 0.10 | −0.08 | ± | 0.58 | −0.01 | ± | 0.25 | [ |
245276_at | AT4G16780 | ATHB2/HAT4 | 1.10 | ± | 0.05 | 0.87 | ± | 0.12 | 0.39 | ± | 0.14 | 0.16 | ± | 0.26 | 1.26 | ± | 0.22 | [ |
262850_at | AT1G14920 | GAI | 0.09 | ± | 0.05 | 0.11 | ± | 0.13 | −0.02 | ± | 0.12 | 0.00 | ± | 0.06 | 0.09 | ± | 0.05 | [ |
258399_at | AT3G15540 | IAA19 | 0.66 | ± | 0.20 | 0.69 | ± | 0.14 | −0.02 | ± | 0.16 | 0.01 | ± | 0.18 | 0.67 | ± | 0.03 | [ |
253423_at | AT4G32280 | IAA29 | 2.15 | ± | 0.13 | 2.07 | ± | 0.60 | 0.17 | ± | 0.43 | 0.09 | ± | 0.27 | 2.24 | ± | 0.17 | [ |
260364_at | AT1G70560 | TAA1/ SAV3 | −0.06 | ± | 0.12 | 0.04 | ± | 0.29 | −0.32 | ± | 0.20 | −0.21 | ± | 0.21 | −0.27 | ± | 0.10 | [ |
253794_at | AT4G28720 | YUC8 | 0.48 | ± | 0.27 | 0.71 | ± | 0.14 | −0.07 | ± | 0.26 | 0.16 | ± | 0.10 | 0.65 | ± | 0.28 | [ |
261109_at | AT1G75450 | CKX5 | 0.20 | ± | 0.13 | 0.26 | ± | 0.11 | 0.24 | ± | 0.20 | 0.30 | ± | 0.21 | 0.51 | ± | 0.24 | [ |
264638_at | AT1G65480 | FT | 2.52 | ± | 0.69 | 2.43 | ± | 0.17 | −0.25 | ± | 0.44 | −0.34 | ± | 0.42 | 2.18 | ± | 0.27 | [ |
246525_at | AT5G15840 | CO | 0.65 | ± | 0.07 | 0.58 | ± | 0.36 | −0.19 | ± | 0.28 | −0.26 | ± | 0.19 | 0.39 | ± | 0.18 | [ |
245325_at | AT4G14130 | XTH15 | 0.49 | ± | 0.08 | 0.31 | ± | 0.10 | −0.01 | ± | 0.10 | −0.19 | ± | 0.04 | 0.30 | ± | 0.11 | [ |
264157_at | AT1G65310 | XTH17 | 0.38 | ± | 0.50 | 0.29 | ± | 0.06 | 0.42 | ± | 0.06 | 0.33 | ± | 0.39 | 0.71 | ± | 0.12 | [ |
250214_at | AT5G13870 | XTH5 | 0.17 | ± | 0.10 | −0.02 | ± | 0.12 | 0.16 | ± | 0.17 | −0.03 | ± | 0.12 | 0.14 | ± | 0.11 | [ |
and at 26˚C (
To investigate the consequence of the above mentioned gene expression response at the phenotypic level, we analyzed typical phenotypes under the conditions we used for this experiment (
Although the typical shade responsive genes did not behave differently upon supplemental far-red light (W+FR) treatments at two different temperatures (
Cluster | Classification Type | Category | Term | Count | p-value | Benjamini |
---|---|---|---|---|---|---|
1 | Gene Ontology | GOTERM_CC_FAT | GO:0005618~cell wall | 12 | 0.001 | 0.028 |
GO:0030312~external encapsulating structure | 12 | 0.001 | 0.016 | |||
Functional Categories | SP_PIR_KEYWORDS | disulfide bond | 17 | 0.000 | 0.000 | |
signal | 20 | 0.000 | 0.001 | |||
secreted | 11 | 0.003 | 0.040 | |||
UP_SEQ_FEATURE | signal peptide | 20 | 0.000 | 0.031 | ||
2 | Gene Ontology | GOTERM_MF_FAT | GO:0008289~lipid binding | 8 | 0.000 | 0.018 |
GOTERM_BP_FAT | GO:0006869~lipid transport | 6 | 0.001 | 0.041 | ||
GO:0010876~lipid localization | 6 | 0.003 | 0.046 | |||
Functional Categories | SP_PIR_KEYWORDS | Lipid-binding | 5 | 0.000 | 0.003 | |
Protein Domains | SMART | SM00499:AAI | 6 | 0.000 | 0.000 | |
INTERPRO | IPR003612:Plant lipid transfer protein/seed storage/trypsin-α amylase inhibito | 6 | 0.000 | 0.017 | ||
IPR000528:Plant lipid transfer protein/Par allergen | 4 | 0.000 | 0.022 | |||
IPR013770:Plant lipid transfer protein and hydrophobic protein, helical | 5 | 0.000 | 0.018 | |||
3 | Gene Ontology | GOTERM_BP_FAT | GO:0019748~secondary metabolic process | 11 | 0.001 | 0.028 |
GO:0009698~phenylpropanoid metabolic process | 7 | 0.001 | 0.031 | |||
GO:0009699~phenylpropanoid biosynthetic process | 6 | 0.002 | 0.041 | |||
GO:0009718~anthocyanin biosynthetic process | 3 | 0.002 | 0.038 | |||
4 | Gene Ontology | GOTERM_BP_FAT | GO:0006979~response to oxidative stress | 10 | 0.000 | 0.020 |
GO:0000302~response to reactive oxygen species | 7 | 0.000 | 0.036 | |||
GO:0034614~cellular response to reactive oxygen species | 6 | 0.000 | 0.029 | |||
GO:0034599~cellular response to oxidative stress | 6 | 0.000 | 0.025 | |||
GO:0006800~oxygen and reactive oxygen species metabolic process | 6 | 0.001 | 0.033 | |||
GO:0042542~response to hydrogen peroxide | 6 | 0.001 | 0.037 | |||
GO:0033554~cellular response to stress | 10 | 0.002 | 0.039 | |||
GO:0042744~hydrogen peroxide catabolic process | 5 | 0.003 | 0.049 | |||
GO:0070301~cellular response to hydrogen peroxide | 5 | 0.003 | 0.049 | |||
GO:0042743~hydrogen peroxide metabolic process | 5 | 0.003 | 0.049 | |||
GO:0010035~response to inorganic substance | 11 | 0.003 | 0.048 |
Functional Categories | SP_PIR_KEYWORDS | hydrogen peroxide | 5 | 0.001 | 0.023 | |
---|---|---|---|---|---|---|
Pyrrolidone carboxylic acid | 4 | 0.002 | 0.043 | |||
peroxidase | 5 | 0.004 | 0.050 | |||
Secreted | 11 | 0.003 | 0.040 | |||
UP_SEQ_FEATURE | disulfide bond | 14 | 0.000 | 0.004 | ||
Protein Domains | INTERPRO | IPR000823:Plant peroxidase | 5 | 0.001 | 0.028 | |
IPR002016:Haem peroxidase, plant/fungal/bacterial | 5 | 0.001 | 0.036 | |||
IPR019794:Peroxidase, active site | 5 | 0.001 | 0.034 | |||
IPR019793:Peroxidases heam-ligand binding site | 5 | 0.002 | 0.036 | |||
5 | Functional Categories | SP_PIR_KEYWORDS | glycosidase | 10 | 0.000 | 0.002 |
polysaccharide degradation | 4 | 0.002 | 0.043 | |||
7 | Functional Categories | SP_PIR_KEYWORDS | glycosidase | 10 | 0.000 | 0.002 |
9 | Gene Ontology | GOTERM_BP_FAT | GO:0010035~response to inorganic substance | 11 | 0.003 | 0.048 |
Cluster | Classification Type | Category | Term | Count | p-value | Benjamini |
---|---|---|---|---|---|---|
1 | Gene Ontology | GOTERM_BP_FAT | GO:0019748~secondary metabolic process | 30 | 0.000 | 0.000 |
GO:0006575~cellular amino acid derivative metabolic process | 21 | 0.000 | 0.000 | |||
GO:0009698~phenylpropanoid metabolic process | 16 | 0.000 | 0.000 | |||
GO:0009699~phenylpropanoid biosynthetic process | 12 | 0.000 | 0.003 | |||
GO:0009813~flavonoid biosynthetic process | 8 | 0.000 | 0.005 | |||
GO:0009812~flavonoid metabolic process | 8 | 0.000 | 0.007 | |||
GO:0019438~aromatic compound biosynthetic process | 14 | 0.000 | 0.013 | |||
GO:0042398~cellular amino acid derivative biosynthetic process | 13 | 0.000 | 0.013 | |||
2 | Functional Categories | UP_SEQ_FEATURE | signal peptide | 45 | 0.000 | 0.000 |
SP_PIR_KEYWORDS | signal | 45 | 0.000 | 0.000 | ||
glycoprotein | 36 | 0.000 | 0.007 | |||
Secreted | 24 | 0.000 | 0.029 | |||
disulfide bond | 21 | 0.001 | 0.029 | |||
4 | Functional Categories | SP_PIR_KEYWORDS | oxidoreductase | 29 | 0.001 | 0.035 |
20 | Gene Ontology | GOTERM_BP_FAT | GO:0009753~response to jasmonic acid stimulus | 12 | 0.000 | 0.013 |
Cluster | Classification Type | Category | Term | Count | p-value | Benjamini |
---|---|---|---|---|---|---|
1 | Protein Domains | INTERPRO | IPR017949:Thaumatin, conserved site | 4 | 0.000 | 0.041 |
IPR001938:Thaumatin, pathogenesis-related | 4 | 0.001 | 0.112 | |||
SMART | SM00205:THN | 4 | 0.001 | 0.044 | ||
PIR_SUPERFAMILY | PIRSF002703:Thaumatin | 4 | 0.001 | 0.094 | ||
PIRSF002703:pathogenesis-related group 5 protein, thaumatin type | 3 | 0.010 | 0.334 | |||
2 | Gene Ontology | GOTERM_MF_FAT | GO:0030528~transcription regulator activity | 29 | 0.001 | 0.138 |
GO:0003700~transcription factor activity | 25 | 0.003 | 0.241 | |||
GO:0003677~DNA binding | 32 | 0.004 | 0.238 | |||
GOTERM_BP_FAT | GO:0045449~regulation of transcription | 29 | 0.004 | 0.519 | ||
GO:0006355~regulation of transcription, DNA-dependent | 18 | 0.010 | 0.664 | |||
GO:0051252~regulation of RNA metabolic process | 18 | 0.010 | 0.620 | |||
Functional Categories | SP_PIR_KEYWORDS | nucleus | 30 | 0.001 | 0.104 | |
DNA-binding | 21 | 0.004 | 0.225 | |||
transcription regulation | 18 | 0.007 | 0.256 | |||
Transcription | 18 | 0.008 | 0.232 | |||
3 | Functional Categories | UP_SEQ_FEATURE | zinc finger region:B box-type 1; atypical | 3 | 0.013 | 0.789 |
zinc finger region:B box-type 2; atypical | 3 | 0.012 | 0.937 | |||
4 | Gene Ontology | GOTERM_BP_FAT | GO:0009627~systemic acquired resistance | 5 | 0.000 | 0.141 |
GO:0009814~defense response, incompatible interaction | 5 | 0.014 | 0.625 | |||
5 | Gene Ontology | GOTERM_BP_FAT | GO:0009314~response to radiation | 12 | 0.004 | 0.469 |
GO:0009639~response to red or far red light | 6 | 0.020 | 0.608 | |||
6 | Gene Ontology | GOTERM_MF_FAT | GO:0015294~solute:cation symporter activity | 6 | 0.005 | 0.218 |
GO:0015293~symporter activity | 6 | 0.009 | 0.318 | |||
7 | Gene Ontology | GOTERM_BP_FAT | GO:0009723~response to ethylene stimulus | 9 | 0.002 | 0.487 |
GO:0000160~two-component signal transduction system | 7 | 0.013 | 0.657 | |||
GO:0009725~response to hormone stimulus | 16 | 0.016 | 0.639 | |||
GO:0009755~hormone-mediated signaling | 10 | 0.017 | 0.612 | |||
GO:0032870~cellular response to hormone stimulus | 10 | 0.017 | 0.612 | |||
GO:0009873~ethylene mediated signaling pathway | 6 | 0.017 | 0.593 | |||
9 | Protein Domains | INTERPRO | IPR013770:Plant lipid transfer protein and hydrophobic protein, helical | 4 | 0.014 | 0.630 |
10 | Protein Domains | INTERPRO | IPR011616:bZIP transcription factor, Bzip-1 | 4 | 0.008 | 0.559 |
11 | Gene Ontology | GOTERM_CC_FAT | GO:0048046~apoplast | 9 | 0.011 | 0.693 |
Functional Categories | SP_PIR_KEYWORDS | disulfide bond | 11 | 0.012 | 0.268 |
Cluster | Classification Type | Category | Term | Count | p-value | Benjamini |
---|---|---|---|---|---|---|
1 | Gene Ontology | GOTERM_CC_FAT | GO:0005576~extracellular region | 5 | 0.007 | 0.072 |
GO:0005618~cell wall | 4 | 0.016 | 0.085 | |||
GO:0030312~external encapsulating structure | 4 | 0.017 | 0.060 |
Light and temperature are important environmental factors for plant development and survival. Both light and temperature can regulate various aspects of physiological process such as seed germination, flowering, plant architecture and cold tolerance. Many studies so far suggest integration of light quality and temperature signals in plants [
Global gene expression change in response to low R:FR light under the standard temperature condition has been studied before [
Comparing the overall gene expression responses to low R:FR light condition (W+FR) at 22˚C and to high temperature (26˚C) condition under WL confirmed the different nature of the two stimuli by showing no correlation between the two responses (
However, the auxin related MapMan bins that responded to light quality and the ones that responded to high temperature were not identical. The genes responded to supplemental far-red light were AUX/IAA genes, homeobox transcription factors, and indole-3-acetic acid amido synthetases (GH3s), whereas the high temperature mostly induced IAA-amino acid conjugate hydrolases (
The expression levels of the majority of genes (
The significant representation of defense related genes among the differentially regulated genes is intriguing. Since our experimental plants were grown under a sterile condition, it is not likely that the plants were consistently infected by pathogens in multiple independent replicates. Given the previously reported connections among temperature, light, and pathogen defense mechanisms, it is not surprising that the genes for defense responses were found differentially regulated under our experimental condition. Jasmonic acid and salicylic acid are not only related to defense mechanisms against various pathogens but also to the regulation of hyponastic growth which is induced by low light intensities [
Our results suggest that there are clear differences in the gene expression patterns in response to low R:FR condition at different temperatures. However, we did not detect any significantly different expression behaviors among the representative shade induced genes under the conditions we tested. Our data also indicate that there is a possibility of differential regulation in auxin content/response in warm temperature response and in shade response. Further investigation is needed to address this in more detail. Despite the similar expression patterns of shade inducible genes, we identified subsets of genes that are differentially regulated under different temperature conditions, which are overrepresented in secondary metabolism, lipid transport, oxidative stress, jasmonic acid, ethylene, light, pathogen defense responses, and extracellular region.
This work is supported by the National Science Foundation (HRD-1137497).
ByungHoon B. Kim,Kaiesa L. Peets,Jamekia S. Grant,Joshua S. Hicks,Dominique C. Zellous,Duane R. Anderson, (2016) Shade-Inducible Gene Expression Change in Arabidopsis thaliana at Different Temperatures. American Journal of Plant Sciences,07,352-423. doi: 10.4236/ajps.2016.72035
Bin | Name | BH corrected p-value | ||||
---|---|---|---|---|---|---|
<1> W+FR effect (22˚C) | <2> W+FR effect (26˚C) | <3> 26˚C effect (WL) | <4> 26˚C effect (W+FR) | <5> W+FR+ 26˚C effect | ||
1. | PS | 0.000 | 0.000 | 0.155 | 0.025 | 0.267 |
1.1. | PS.lightreaction | 0.000 | 0.001 | 0.006 | 0.000 | 0.813 |
1.1.1. | PS.lightreaction.photosystem II | 0.000 | 0.004 | 0.880 | 0.007 | 0.354 |
1.1.1.1. | PS.lightreaction.photosystem II.LHC-II | 0.035 | 0.395 | 0.703 | 0.035 | 0.738 |
1.1.1.2. | PS.lightreaction.photosystem II.PSII polypeptide subunits | 0.000 | 0.024 | 0.991 | 0.191 | 0.397 |
1.1.2. | PS.lightreaction.photosystem I | 0.000 | 0.047 | 0.164 | 0.006 | 0.853 |
1.1.2.2. | PS.lightreaction.photosystem I.PSI polypeptide subunits | 0.017 | 0.374 | 0.199 | 0.007 | 0.891 |
1.3. | PS.calvin cyle | 0.729 | 0.006 | 0.412 | 0.027 | 0.005 |
4. | glycolysis | 0.826 | 0.906 | 0.189 | 0.045 | 0.190 |
10. | cell wall | 0.017 | 0.225 | 0.009 | 0.474 | 0.012 |
10.6.2. | cell wall.degradation.mannan-xylose-arabinose-fucose | 0.878 | 0.428 | 0.541 | 0.035 | 0.298 |
14. | S-assimilation | 0.301 | 0.628 | 0.029 | 0.009 | 0.137 |
16. | secondary metabolism | 0.994 | 0.008 | 0.000 | 0.080 | 0.369 |
16.1. | secondary metabolism.isoprenoids | 0.017 | 0.525 | 0.653 | 0.772 | 0.309 |
16.1.1. | secondary metabolism.isoprenoids.non-mevalonate pathway | 0.005 | 0.428 | 0.935 | 0.461 | 0.451 |
16.2. | secondary metabolism.phenylpropanoids | 0.712 | 0.789 | 0.010 | 0.446 | 0.426 |
16.5. | secondary metabolism.sulfur-containing | 0.406 | 0.779 | 0.000 | 0.000 | 0.000 |
16.5.1. | secondary metabolism.sulfur-containing.glucosinolates | 0.241 | 0.852 | 0.000 | 0.000 | 0.000 |
16.5.1.1. | secondary metabolism.sulfur-containing.glucosinolates.synthesis | 0.288 | 0.984 | 0.000 | 0.001 | 0.000 |
16.5.1.1.1. | secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic | 0.519 | 0.928 | 0.000 | 0.002 | 0.000 |
16.8. | secondary metabolism.flavonoids | 0.885 | 0.002 | 0.020 | 0.452 | 0.484 |
16.8.1. | secondary metabolism.flavonoids.anthocyanins | 0.660 | 0.003 | 0.017 | 0.913 | 0.497 |
16.8.1.21. | secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase | 0.660 | 0.047 | 0.181 | 0.970 | 0.279 |
17. | hormone metabolism | 0.885 | 0.843 | 0.000 | 0.000 | 0.000 |
17.2. | hormone metabolism.auxin | 0.472 | 0.159 | 0.017 | 0.003 | 0.001 |
17.2.1. | hormone metabolism.auxin.synthesis-degradation | 0.793 | 0.525 | 0.011 | 0.032 | 0.267 |
17.2.3. | hormone metabolism.auxin.induced-regulated-responsive-activated | 0.262 | 0.028 | 0.229 | 0.041 | 0.009 |
17.7. | hormone metabolism.jasmonate | 0.660 | 0.532 | 0.000 | 0.000 | 0.000 |
17.7.1. | hormone metabolism.jasmonate.synthesis-degradation | 0.879 | 0.757 | 0.002 | 0.002 | 0.017 |
17.7.1.2. | hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase | 0.660 | 0.976 | 0.025 | 0.403 | 0.160 |
17.7.3. | hormone metabolism.jasmonate.induced-regulated-responsive-activated | 0.375 | 0.555 | 0.000 | 0.144 | 0.003 |
18. | Co-factor and vitamine metabolism | 0.729 | 0.628 | 0.164 | 0.128 | 0.043 |
---|---|---|---|---|---|---|
19. | tetrapyrrole synthesis | 0.000 | 0.015 | 0.015 | 0.949 | 0.000 |
20. | stress | 0.543 | 0.000 | 0.035 | 0.463 | 0.791 |
20.1. | stress.biotic | 0.008 | 0.000 | 0.799 | 0.656 | 0.017 |
20.1.7. | stress.biotic.PR-proteins | 0.081 | 0.000 | 0.880 | 0.883 | 0.022 |
20.1.7.6. | stress.biotic.PR-proteins.proteinase inhibitors | 0.660 | 0.030 | 0.028 | 0.699 | 0.612 |
20.2. | stress.abiotic | 0.810 | 0.165 | 0.006 | 0.495 | 0.192 |
20.2.1. | stress.abiotic.heat | 0.343 | 0.637 | 0.004 | 0.544 | 0.047 |
21. | redox | 0.214 | 0.008 | 0.835 | 0.531 | 0.560 |
21.1. | redox.thioredoxin | 0.026 | 0.014 | 0.920 | 0.800 | 0.124 |
23.1.2. | nucleotide metabolism.synthesis.purine | 0.769 | 0.756 | 0.081 | 0.037 | 0.097 |
26. | misc | 0.983 | 0.000 | 0.000 | 0.303 | 0.344 |
26.1. | misc.cytochrome P450 | 0.971 | 0.015 | 0.002 | 0.970 | 0.528 |
26.8. | misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases | 0.660 | 0.004 | 0.347 | 0.841 | 0.751 |
26.9. | misc.glutathione S transferases | 0.672 | 0.002 | 0.323 | 0.911 | 0.517 |
26.12. | misc.peroxidases | 0.825 | 0.196 | 0.003 | 0.499 | 0.484 |
26.16. | misc.myrosinases-lectin-jacalin | 0.948 | 0.202 | 0.024 | 0.144 | 0.117 |
26.28. | misc.GDSL-motif lipase | 0.660 | 0.604 | 0.010 | 0.600 | 0.097 |
27. | RNA | 0.000 | 0.000 | 0.809 | 0.835 | 0.000 |
27.1. | RNA.processing | 0.660 | 0.041 | 0.216 | 0.383 | 0.970 |
27.1.1. | RNA.processing.splicing | 0.948 | 0.023 | 0.934 | 0.347 | 0.329 |
27.3. | RNA.regulation of transcription | 0.000 | 0.000 | 0.735 | 0.666 | 0.000 |
27.3.4. | RNA.regulation of transcription.ARF, Auxin Response Factor family | 0.100 | 0.010 | 0.714 | 0.970 | 0.464 |
27.3.8. | RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family | 0.885 | 0.392 | 0.483 | 0.041 | 0.097 |
27.3.14. | RNA.regulation of transcription.CCAAT box binding factor family, HAP2 | 0.879 | 0.191 | 0.323 | 0.107 | 0.022 |
27.3.20. | RNA.regulation of transcription.G2-like transcription factor family, GARP | 0.689 | 0.023 | 0.265 | 0.149 | 0.011 |
27.3.22. | RNA.regulation of transcription.HB,Homeobox transcription factor family | 0.017 | 0.335 | 0.148 | 0.758 | 0.022 |
27.3.25. | RNA.regulation of transcription.MYB domain transcription factor family | 0.285 | 0.757 | 0.074 | 0.397 | 0.009 |
27.3.40. | RNA.regulation of transcription.Aux/IAA family | 0.002 | 0.045 | 0.261 | 0.766 | 0.022 |
28. | DNA | 0.628 | 0.000 | 0.000 | 0.088 | 0.685 |
28.1. | DNA.synthesis/chromatin structure | 0.990 | 0.003 | 0.000 | 0.386 | 0.538 |
28.1.3. | DNA.synthesis/chromatin structure.histone | 0.231 | 0.467 | 0.000 | 0.544 | 0.022 |
29. | protein | 0.826 | 0.577 | 0.000 | 0.001 | 0.000 |
29.1. | protein.aa activation | 0.895 | 0.975 | 0.009 | 0.018 | 0.043 |
29.2. | protein.synthesis | 0.898 | 0.789 | 0.000 | 0.000 | 0.000 |
29.2.1. | protein.synthesis.ribosomal protein | 0.885 | 0.852 | 0.000 | 0.000 | 0.000 |
29.2.1.1. | protein.synthesis.ribosomal protein.prokaryotic | 0.021 | 0.690 | 0.000 | 0.004 | 0.000 |
---|---|---|---|---|---|---|
29.2.1.1.1. | protein.synthesis.ribosomal protein.prokaryotic.chloroplast | 0.000 | 0.191 | 0.000 | 0.128 | 0.000 |
29.2.1.1.1.1. | protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | 0.225 | 0.966 | 0.013 | 0.497 | 0.006 |
29.2.1.1.1.2. | protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | 0.002 | 0.059 | 0.003 | 0.242 | 0.000 |
29.2.1.1.3. | protein.synthesis.ribosomal protein.prokaryotic.unknown organellar | 0.955 | 0.894 | 0.029 | 0.058 | 0.023 |
29.2.1.2. | protein.synthesis.ribosomal protein.eukaryotic | 0.450 | 0.525 | 0.000 | 0.000 | 0.000 |
29.2.1.2.1. | protein.synthesis.ribosomal protein.eukaryotic.40S subunit | 0.689 | 0.852 | 0.000 | 0.000 | 0.000 |
29.2.1.2.2. | protein.synthesis.ribosomal protein.eukaryotic.60S subunit | 0.013 | 0.106 | 0.000 | 0.000 | 0.000 |
29.2.3. | protein.synthesis.initiation | 0.202 | 0.789 | 0.189 | 0.002 | 0.484 |
29.3.2. | protein.targeting.mitochondria | 0.979 | 0.928 | 0.011 | 0.035 | 0.083 |
29.3.3. | protein.targeting.chloroplast | 0.885 | 0.756 | 0.104 | 0.172 | 0.023 |
29.4. | protein.postranslational modification | 0.005 | 0.007 | 0.991 | 0.970 | 0.097 |
29.4.1. | protein.postranslational modification.kinase | 0.021 | 0.593 | 0.950 | 0.308 | 0.612 |
29.5. | protein.degradation | 0.019 | 0.966 | 0.009 | 0.000 | 0.032 |
29.5.2. | protein.degradation.autophagy | 0.571 | 0.963 | 0.233 | 0.008 | 0.344 |
29.5.3. | protein.degradation.cysteine protease | 0.771 | 0.779 | 0.003 | 0.386 | 0.015 |
29.5.11. | protein.degradation.ubiquitin | 0.030 | 0.982 | 0.007 | 0.000 | 0.022 |
29.5.11.4. | protein.degradation.ubiquitin.E3 | 0.276 | 0.894 | 0.000 | 0.000 | 0.000 |
29.5.11.4.2. | protein.degradation.ubiquitin.E3.RING | 0.879 | 0.894 | 0.006 | 0.000 | 0.005 |
29.5.11.4.3. | protein.degradation.ubiquitin.E3.SCF | 0.254 | 0.779 | 0.006 | 0.000 | 0.007 |
29.5.11.4.3.2. | protein.degradation.ubiquitin.E3.SCF.FBOX | 0.344 | 0.678 | 0.009 | 0.000 | 0.004 |
29.5.11.20. | protein.degradation.ubiquitin.proteasom | 0.225 | 0.966 | 0.002 | 0.446 | 0.005 |
29.6. | protein.folding | 0.826 | 0.133 | 0.229 | 0.029 | 0.007 |
30.11. | signalling.light | 0.285 | 0.122 | 0.216 | 0.439 | 0.006 |
31. | cell | 0.454 | 0.000 | 0.096 | 0.906 | 0.174 |
31.1. | cell.organisation | 0.112 | 0.009 | 0.216 | 0.449 | 0.584 |
31.3. | cell.cycle | 0.729 | 0.015 | 0.309 | 0.970 | 0.612 |
33.3. | development.squamosa promoter binding like (SPL) | 0.225 | 0.125 | 0.398 | 0.464 | 0.012 |
34. | transport | 0.002 | 0.014 | 0.596 | 0.347 | 0.510 |
34.2. | transporter.sugars | 0.000 | 0.351 | 0.631 | 0.392 | 0.272 |
34.6. | transport.sulphate | 0.729 | 0.852 | 0.010 | 0.008 | 0.043 |
34.19. | transport.Major Intrinsic Proteins | 0.109 | 0.529 | 0.017 | 0.010 | 0.544 |
34.19.1. | transport.Major Intrinsic Proteins.PIP | 0.214 | 0.815 | 0.010 | 0.000 | 0.242 |
35.1. | not assigned.no ontology | 0.100 | 0.809 | 0.657 | 0.001 | 0.528 |
35.1.5. | not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein | 0.017 | 0.996 | 0.238 | 0.000 | 0.287 |
Average Gene Expression (log2 ratio) | |||||
---|---|---|---|---|---|
W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect | |
Cluster a | 0.60 | 0.57 | 0.14 | 0.11 | 0.71 |
Cluster b | 0.19 | 0.37 | 0.16 | 0.33 | 0.53 |
Cluster c | 0.35 | 0.17 | 0.37 | 0.20 | 0.55 |
Cluster d | −0.12 | −0.32 | −0.33 | −0.53 | −0.65 |
Cluster e | −0.01 | 0.02 | −0.52 | −0.50 | −0.50 |
Cluster f | 0.69 | 0.16 | 0.17 | −0.36 | 0.33 |
Cluster g | 0.24 | −0.07 | −0.25 | −0.57 | −0.33 |
Cluster h | 0.17 | 0.22 | 0.38 | 0.43 | 0.60 |
Cluster i | 0.09 | −0.19 | 0.86 | 0.59 | 0.67 |
Cluster j | −0.28 | −0.03 | 0.27 | 0.52 | 0.24 |
Cluster k | −0.39 | −0.38 | −0.28 | −0.27 | −0.66 |
ID | Locus | Description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
244933_at | ATCG01070 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | 0.45 | 0.25 | 0.25 | 0.05 | 0.50 |
244937_at | ATCG01110 | NAD(P)H dehydrogenase subunit H | 0.45 | 0.45 | 0.04 | 0.04 | 0.49 |
244959_s_at | AT2G07708 | [AT2G07708, unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG00500.1); Has 9 Blast hits to 9 proteins in 2 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-9; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink).];[ATMG00500, hypothetical protein]; [ATMG00490, Mitovirus RNA-dependent RNA polymerase] | 0.33 | 0.28 | 0.24 | 0.19 | 0.52 |
244977_at | ATCG00730 | photosynthetic electron transfer D | 0.72 | 0.66 | 0.22 | 0.16 | 0.88 |
245000_at | ATCG00210 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem IIs | 0.64 | 0.46 | 0.47 | 0.29 | 0.93 |
245076_at | AT2G23170 | Auxin-responsive GH3 family protein | 0.23 | 0.51 | −0.12 | 0.16 | 0.39 |
245276_at | AT4G16780 | homeobox protein 2 | 1.10 | 0.87 | 0.39 | 0.16 | 1.26 |
245336_at | AT4G16515 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). | 0.76 | 0.64 | 0.06 | −0.06 | 0.70 |
245397_at | AT4G14560 | indole-3-acetic acid inducible | 0.57 | 0.59 | 0.11 | 0.13 | 0.70 |
245645_at | AT1G24764 | microtubule-associated proteins 70-2 | 0.37 | 0.35 | 0.12 | 0.10 | 0.47 |
246225_at | AT4G36910 | Cystathionine beta-synthase (CBS) family protein | 0.27 | 0.16 | 0.19 | 0.08 | 0.35 |
247474_at | AT5G62280 | Protein of unknown function (DUF1442) | 0.80 | 1.66 | −0.30 | 0.55 | 1.35 |
247854_at | AT5G58200 | Calcineurin-like metallo-phosphoesterase superfamily protein | 0.21 | 0.20 | 0.16 | 0.15 | 0.36 |
247880_at | AT5G57780 | EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-123; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.36 | 0.25 | 0.24 | 0.12 | 0.48 |
248801_at | AT5G47370 | Homeobox-leucine zipper protein 4 (HB-4)/HD-ZIP protein | 0.61 | 0.71 | 0.22 | 0.31 | 0.92 |
249894_at | AT5G22580 | Stress responsive A/B Barrel Domain | 0.46 | 0.49 | 0.05 | 0.08 | 0.53 |
249917_at | AT5G22460 | alpha/beta-Hydrolases superfamily protein | 0.78 | 0.59 | −0.17 | −0.37 | 0.42 |
250012_x_at | AT5G18060 | SAUR-like auxin-responsive protein family | 0.88 | 0.72 | 0.49 | 0.33 | 1.21 |
250120_at | AT5G16490 | ROP-interactive CRIB motif-containing protein 4 | 0.32 | 0.27 | 0.29 | 0.24 | 0.56 |
250327_at | AT5G12050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae-0; Bacteria-0; Metazoa-736; Fungi-347; Plants-385; Viruses-0; Other Eukaryotes-339 (source: NCBI BLink). | 0.64 | 0.76 | 0.04 | 0.16 | 0.80 |
250872_at | AT5G03960 | IQ-domain 12 | 0.57 | 0.55 | 0.07 | 0.05 | 0.63 |
251010_at | AT5G02550 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-3; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.44 | 0.41 | 0.14 | 0.11 | 0.55 |
---|---|---|---|---|---|---|---|
251017_at | AT5G02760 | Protein phosphatase 2C family protein | 0.65 | 0.77 | 0.04 | 0.16 | 0.81 |
251072_at | AT5G01740 | Nuclear transport factor 2 (NTF2) family protein | 0.55 | 0.49 | 0.26 | 0.19 | 0.74 |
251144_at | AT5G01210 | HXXXD-type acyl-transferase family protein | 0.36 | 0.34 | 0.24 | 0.22 | 0.58 |
251271_at | AT3G62050 | Putative endonuclease or glycosyl hydrolase | 0.37 | 0.27 | 0.16 | 0.06 | 0.43 |
252204_at | AT3G50340 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae-0; Bacteria-46; Metazoa-0; Fungi-3; Plants-76; Viruses-0; Other Eukaryotes-3 (source: NCBI BLink). | 0.33 | 0.39 | 0.12 | 0.18 | 0.50 |
252296_at | AT3G48970 | Heavy metal transport/detoxification superfamily protein | 0.43 | 0.46 | 0.08 | 0.11 | 0.54 |
252983_at | AT4G37980 | elicitor-activated gene 3-1 | 0.32 | 0.35 | 0.09 | 0.12 | 0.44 |
253191_at | AT4G35350 | xylem cysteine peptidase 1 | 0.44 | 0.39 | 0.16 | 0.11 | 0.55 |
253423_at | AT4G32280 | indole-3-acetic acid inducible 29 | 2.15 | 2.07 | 0.17 | 0.09 | 2.24 |
253791_at | AT4G28640 | indole-3-acetic acid inducible 11 | 0.33 | 0.29 | 0.21 | 0.17 | 0.50 |
253794_at | AT4G28720 | Flavin-binding monooxygenase family protein | 0.48 | 0.71 | −0.07 | 0.16 | 0.65 |
254319_at | AT4G22560 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits to 380 proteins in 21 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-6; Plants-374; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.37 | 0.30 | 0.18 | 0.11 | 0.48 |
254328_at | AT4G22570 | adenine phosphoribosyl transferase 3 | 0.34 | 0.28 | 0.25 | 0.19 | 0.53 |
255538_at | AT4G01680 | myb domain protein 55 | 0.41 | 0.21 | 0.26 | 0.07 | 0.48 |
255694_at | AT4G00050 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.36 | 0.28 | 0.26 | 0.19 | 0.54 |
256384_at | AT1G66660 | Protein with RING/U-box and TRAF-like domains | 0.27 | 0.23 | 0.23 | 0.19 | 0.46 |
257650_at | AT3G16800 | Protein phosphatase 2C family protein | 0.68 | 0.54 | 0.25 | 0.11 | 0.80 |
257766_at | AT3G23030 | indole-3-acetic acid inducible 2 | 0.52 | 0.51 | 0.17 | 0.16 | 0.68 |
258399_at | AT3G15540 | indole-3-acetic acid inducible 19 | 0.66 | 0.69 | −0.02 | 0.01 | 0.67 |
258807_at | AT3G04030 | Homeodomain-like superfamily protein | 0.48 | 0.48 | 0.02 | 0.01 | 0.50 |
259417_at | AT1G02340 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 2.39 | 2.48 | 0.38 | 0.47 | 2.86 |
259773_at | AT1G29500 | SAUR-like auxin-responsive protein family | 0.55 | 0.55 | 0.23 | 0.24 | 0.78 |
259784_at | AT1G29450 | SAUR-like auxin-responsive protein family | 0.39 | 0.45 | 0.16 | 0.22 | 0.61 |
260753_at | AT1G49230 | RING/U-box superfamily protein | 0.55 | 0.52 | −0.05 | −0.08 | 0.47 |
261023_at | AT1G12200 | Flavin-binding monooxygenase family protein | 0.42 | 0.32 | 0.24 | 0.15 | 0.56 |
261292_at | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-21; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.44 | 0.27 | 0.18 | 0.00 | 0.44 |
262050_at | AT1G80130 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1.11 | 0.91 | 0.11 | −0.09 | 1.02 |
263002_at | AT1G54200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae-0; Bacteria-72; Metazoa-212; Fungi-78; Plants-102; Viruses-0; Other Eukaryotes-620 (source: NCBI BLink). | 0.60 | 0.39 | 0.29 | 0.09 | 0.69 |
---|---|---|---|---|---|---|---|
263971_at | AT2G42800 | receptor like protein 29 | 0.53 | 0.58 | −0.19 | −0.14 | 0.39 |
264100_at | AT1G78970 | lupeol synthase 1 | 0.93 | 0.83 | −0.06 | −0.16 | 0.77 |
264594_at | AT2G17640 | Trimeric LpxA-like enzymes superfamily protein | 0.32 | 0.27 | 0.08 | 0.04 | 0.36 |
264638_at | AT1G65480 | PEBP (phosphatidylethanolamine-binding protein) family protein | 2.52 | 2.43 | −0.25 | −0.34 | 2.18 |
264947_at | AT1G77020 | DNAJ heat shock N-terminal domain-containing protein | 0.40 | 0.26 | 0.18 | 0.04 | 0.45 |
265194_at | AT1G05010 | ethylene-forming enzyme | 0.33 | 0.22 | 0.14 | 0.03 | 0.36 |
265494_at | AT2G15680 | Calcium-binding EF-hand family protein | 0.46 | 0.37 | 0.29 | 0.19 | 0.66 |
266415_at | AT2G38530 | lipid transfer protein 2 | 0.70 | 0.38 | 0.33 | 0.00 | 0.71 |
266516_at | AT2G47880 | Glutaredoxin family protein | 0.64 | 0.96 | −0.33 | −0.01 | 0.63 |
267141_at | AT2G38090 | Duplicated homeodomain-like superfamily protein | 0.52 | 0.44 | 0.19 | 0.11 | 0.63 |
267460_at | AT2G33810 | squamosa promoter binding protein-like 3 | 0.33 | 0.50 | 0.09 | 0.26 | 0.58 |
ID | Locus | Description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
247648_at | AT5G60020 | laccase 17 | 0.16 | 0.33 | 0.17 | 0.34 | 0.50 |
248121_at | AT5G54690 | galacturonosyltransferase 12 | 0.13 | 0.27 | 0.13 | 0.26 | 0.39 |
248282_at | AT5G52900 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae-12; Bacteria-1396; Metazoa-17338; Fungi-3422; Plants-5037; Viruses-0; Other Eukaryotes-2996 (source: NCBI BLink). | 0.13 | 0.34 | 0.10 | 0.31 | 0.44 |
249614_at | AT5G37300 | O-acyltransferase (WSD1-like) family protein | 0.47 | 0.56 | 0.30 | 0.39 | 0.86 |
251056_at | AT5G01770 | HEAT repeat ;WD domain, G-beta repeat protein protein | 0.17 | 0.18 | 0.16 | 0.17 | 0.35 |
252200_at | AT3G50280 | HXXXD-type acyl-transferase family protein | 0.25 | 0.30 | 0.24 | 0.29 | 0.54 |
253182_at | AT4G35190 | Putative lysine decarboxylase family protein | 0.16 | 0.49 | 0.08 | 0.41 | 0.57 |
253660_at | AT4G30140 | GDSL-like Lipase/Acylhydrolase superfamily protein | −0.13 | 0.36 | −0.13 | 0.36 | 0.23 |
253908_at | AT4G27260 | Auxin-responsive GH3 family protein | 0.52 | 0.63 | 0.32 | 0.43 | 0.95 |
254758_at | AT4G13260 | Flavin-binding monooxygenase family protein | 0.10 | 0.37 | 0.13 | 0.39 | 0.50 |
255957_at | AT1G22160 | Protein of unknown function (DUF581) | 0.17 | 0.52 | 0.13 | 0.48 | 0.66 |
258338_at | AT3G16150 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | −0.11 | 0.42 | 0.02 | 0.55 | 0.44 |
259180_at | AT3G01680 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-122; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.14 | 0.20 | 0.15 | 0.21 | 0.35 |
259783_at | AT1G29510 | SAUR-like auxin-responsive protein family | 0.22 | 0.33 | 0.19 | 0.30 | 0.52 |
---|---|---|---|---|---|---|---|
259787_at | AT1G29460 | SAUR-like auxin-responsive protein family | 0.30 | 0.41 | 0.18 | 0.29 | 0.59 |
259839_at | AT1G52190 | Major facilitator superfamily protein | 0.14 | 0.32 | 0.15 | 0.32 | 0.47 |
259971_at | AT1G76580 | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | 0.17 | 0.25 | 0.10 | 0.17 | 0.34 |
261077_at | AT1G07430 | highly ABA-induced PP2C gene 2 | 0.44 | 0.61 | 0.35 | 0.52 | 0.96 |
262872_at | AT1G64690 | branchless trichome | 0.20 | 0.23 | 0.10 | 0.14 | 0.33 |
264021_at | AT2G21200 | SAUR-like auxin-responsive protein family | 0.38 | 0.40 | 0.26 | 0.28 | 0.66 |
264795_at | AT1G08680 | ARF GAP-like zinc finger-containing protein ZIGA4 | 0.31 | 0.35 | 0.20 | 0.25 | 0.55 |
267077_at | AT2G40970 | Homeodomain-like superfamily protein | 0.11 | 0.39 | 0.26 | 0.53 | 0.64 |
267515_at | AT2G45680 | TCP family transcription factor | 0.03 | 0.24 | 0.11 | 0.32 | 0.35 |
ID | Locus | Description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
244903_at | ATMG00660 | hypothetical protein | 0.62 | 0.23 | 0.49 | 0.11 | 0.73 |
249070_at | AT5G44030 | cellulose synthase A4 | 0.20 | 0.14 | 0.29 | 0.24 | 0.43 |
249383_at | AT5G39860 | basic helix-loop-helix (bHLH) DNA-binding family protein | 1.04 | 0.37 | 0.90 | 0.23 | 1.27 |
251505_at | AT3G59052 | [AT3G59052, conserved peptide upstream open reading frame 18]; [AT3G59050, polyamine oxidase 3] | 0.19 | 0.17 | 0.21 | 0.19 | 0.38 |
251791_at | AT3G55500 | expansin A16 | 0.49 | 0.24 | 0.42 | 0.17 | 0.66 |
251925_at | AT3G54000 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro: IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-94; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.33 | 0.16 | 0.40 | 0.23 | 0.56 |
252025_at | AT3G52900 | Family of unknown function (DUF662) | 0.28 | 0.18 | 0.34 | 0.23 | 0.52 |
252938_at | AT4G39190 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae-12; Bacteria-497; Metazoa-1363; Fungi-374; Plants-149; Viruses-22; Other Eukaryotes-3119 (source: NCBI BLink). | 0.30 | 0.13 | 0.27 | 0.09 | 0.39 |
253620_at | AT4G30520 | Leucine-rich repeat protein kinase family protein | 0.22 | 0.12 | 0.26 | 0.15 | 0.38 |
253919_at | AT4G27350 | Protein of unknown function (DUF1223) | 0.29 | 0.17 | 0.37 | 0.24 | 0.53 |
254258_at | AT4G23410 | tetraspanin5 | 0.26 | 0.13 | 0.29 | 0.16 | 0.42 |
254305_at | AT4G22200 | potassium transport 2/3 | 0.27 | 0.15 | 0.34 | 0.22 | 0.49 |
254609_at | AT4G18970 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.27 | 0.16 | 0.22 | 0.11 | 0.38 |
255760_at | AT1G16780 | Inorganic H pyrophosphatase family protein | 0.28 | 0.15 | 0.32 | 0.19 | 0.47 |
256389_at | AT3G06220 | AP2/B3-like transcriptional factor family protein | 0.30 | 0.07 | 0.35 | 0.12 | 0.42 |
258876_at | AT3G03120 | ADP-ribosylation factor B1C | 0.22 | 0.17 | 0.26 | 0.21 | 0.43 |
259165_at | AT3G01470 | [AT3G01470, homeobox 1]; [AT3G01472, conserved peptide upstream open reading frame 33] | 0.22 | 0.18 | 0.29 | 0.24 | 0.46 |
259166_at | AT3G01670 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-121; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.25 | 0.12 | 0.35 | 0.21 | 0.47 |
---|---|---|---|---|---|---|---|
259381_s_at | AT3G16410 | [AT3G16410, nitrile specifier protein 4];[AT3G16390, nitrile specifier protein 3]; [AT3G16400, nitrile specifier protein 1] | 0.50 | 0.16 | 0.54 | 0.20 | 0.70 |
259937_s_at | AT3G13080 | [AT3G13080, multidrug resistance-associated protein 3];[AT1G71330, non-intrinsic ABC protein 5] | 0.22 | 0.18 | 0.24 | 0.20 | 0.42 |
260112_at | AT1G63310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-78; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.25 | 0.20 | 0.32 | 0.27 | 0.52 |
260666_at | AT1G19300 | Nucleotide-diphospho-sugar transferases superfamily protein | 0.31 | 0.17 | 0.29 | 0.15 | 0.46 |
262204_at | AT2G01100 | unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae-0; Bacteria-1003; Metazoa-10257; Fungi-1826; Plants-1570; Viruses-56; Other Eukaryotes-4708 (source: NCBI BLink). | 0.35 | 0.14 | 0.37 | 0.16 | 0.52 |
262615_at | AT1G13950 | eukaryotic elongation factor 5A-1 | 0.51 | 0.05 | 0.67 | 0.21 | 0.72 |
262733_s_at | AT1G28660 | [AT1G28660, GDSL-like Lipase/Acylhydrolase superfamily protein]; [AT1G28670, GDSL-like Lipase/Acylhydrolase superfamily protein] | 0.36 | 0.12 | 0.30 | 0.06 | 0.41 |
263545_at | AT2G21560 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae-0; Bacteria-156; Metazoa-1145; Fungi-322; Plants-177; Viruses-6; Other Eukaryotes-1879 (source: NCBI BLink). | 0.36 | 0.21 | 0.30 | 0.15 | 0.51 |
264156_at | AT1G65280 | DNAJ heat shock N-terminal domain-containing protein | 0.30 | 0.11 | 0.31 | 0.12 | 0.42 |
264157_at | AT1G65310 | xyloglucan endotransglucosylase/hydrolase 17 | 0.38 | 0.29 | 0.42 | 0.33 | 0.71 |
265228_s_at | ATMG01190 | [ATMG01190, ATP synthase subunit 1]; [AT2G07698, ATPase, F1 complex, alpha subunit protein] | 0.42 | 0.14 | 0.42 | 0.14 | 0.56 |
265230_s_at | ATMG00480 | [ATMG00480, Plant mitochondrial ATPase, F0 complex, subunit 8 protein]; [AT2G07707, Plant mitochondrial ATPase, F0 complex, subunit 8 protein] | 0.30 | 0.23 | 0.40 | 0.32 | 0.63 |
265463_at | AT2G37090 | Nucleotide-diphospho-sugar transferases superfamily protein | 0.39 | 0.18 | 0.42 | 0.21 | 0.60 |
265576_at | AT2G20190 | CLIP-associated protein | 0.22 | 0.13 | 0.23 | 0.13 | 0.35 |
266613_at | AT2G14900 | Gibberellin-regulated family protein | 0.66 | 0.45 | 0.62 | 0.41 | 1.07 |
267094_at | AT2G38080 | Laccase/Diphenol oxidase family protein | 0.42 | 0.14 | 0.51 | 0.23 | 0.65 |
ID | Locus | description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
245319_at | AT4G16146 | cAMP-regulated phosphoprotein 19-related protein | −0.06 | −0.21 | −0.30 | −0.46 | −0.52 |
246270_at | AT4G36500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-50; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | −0.13 | −0.21 | −0.28 | −0.36 | −0.49 |
247444_at | AT5G62630 | hipl2 protein precursor | −0.11 | −0.20 | −0.25 | −0.34 | −0.44 |
247766_at | AT5G58870 | FTSH protease 9 | −0.21 | −0.27 | −0.25 | −0.31 | −0.52 |
---|---|---|---|---|---|---|---|
249061_at | AT5G44550 | Uncharacterised protein family (UPF0497) | −0.17 | −0.33 | −0.29 | −0.46 | −0.62 |
249918_at | AT5G19240 | Glycoprotein membrane precursor GPI-anchored | −0.15 | −0.26 | −0.34 | −0.45 | −0.60 |
250942_at | AT5G03350 | Legume lectin family protein | −0.24 | −0.88 | −0.79 | −1.43 | −1.67 |
252102_at | AT3G50970 | dehydrin family protein | 0.14 | −0.58 | −0.55 | −1.27 | −1.13 |
252853_at | AT4G39710 | FK506-binding protein 16-2 | −0.04 | −0.19 | −0.25 | −0.40 | −0.44 |
253859_at | AT4G27657 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae-12; Bacteria-1396; Metazoa-17338; Fungi-3422; Plants-5037; Viruses-0; Other Eukaryotes-2996 (source: NCBI BLink). | −0.14 | −0.21 | −0.20 | −0.27 | −0.41 |
256060_at | AT1G07050 | CCT motif family protein | −0.35 | −0.49 | −0.47 | −0.61 | −0.96 |
261166_s_at | AT3G15750 | [AT3G15750, Essential protein Yae1, N-terminal]; [AT1G34570, Essential protein Yae1, N-terminal] | −0.16 | −0.25 | −0.28 | −0.37 | −0.52 |
262450_at | AT1G11320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae-0; Bacteria-2; Metazoa-0; Fungi-0; Plants-44; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.01 | −0.15 | −0.19 | −0.34 | −0.34 |
262693_at | AT1G62780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae-6; Bacteria-10; Metazoa-21; Fungi-2; Plants-48; Viruses-0; Other Eukaryotes-7 (source: NCBI BLink). | 0.05 | −0.21 | −0.24 | −0.50 | −0.45 |
265075_at | AT1G55450 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | −0.30 | −0.39 | −0.31 | −0.41 | −0.71 |
ID | Locus | Description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
245306_at | AT4G14690 | Chlorophyll A-B binding family protein | −0.12 | 0.16 | −1.29 | −1.02 | −1.14 |
245937_at | AT5G19750 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | 0.00 | −0.04 | −0.47 | −0.52 | −0.52 |
246293_at | AT3G56710 | sigma factor binding protein 1 | −0.10 | −0.22 | −0.45 | −0.56 | −0.66 |
247347_at | AT5G63780 | RING/FYVE/PHD zinc finger superfamily protein | −0.07 | −0.11 | −0.32 | −0.36 | −0.43 |
247362_at | AT5G63140 | purple acid phosphatase 29 | 0.25 | 0.22 | −0.49 | −0.52 | −0.27 |
248062_at | AT5G55450 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | 0.23 | 0.17 | −0.94 | −1.00 | −0.77 |
248614_at | AT5G49560 | Putative methyltransferase family protein | 0.39 | 0.30 | −0.57 | −0.66 | −0.27 |
248744_at | AT5G48250 | B-box type zinc finger protein with CCT domain | −0.03 | −0.02 | −0.49 | −0.48 | −0.51 |
249174_at | AT5G42900 | cold regulated gene 27 | −0.26 | −0.27 | −0.56 | −0.56 | −0.83 |
249477_s_at | AT5G38940 | [AT5G38940, RmlC-like cupins superfamily protein]; [AT5G38930, RmlC-like cupins superfamily protein] | 0.17 | 0.43 | −0.63 | −0.37 | −0.20 |
250837_at | AT5G04620 | biotin F | −0.03 | −0.05 | −0.51 | −0.54 | −0.56 |
---|---|---|---|---|---|---|---|
251701_at | AT3G56650 | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | −0.14 | −0.07 | −0.36 | −0.29 | −0.43 |
252468_at | AT3G46970 | Alpha-glucan phosphorylase 2 | −0.15 | −0.11 | −0.29 | −0.25 | −0.40 |
252659_at | AT3G44430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41660.1); Has 6 Blast hits to 6 proteins in 1 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−6; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.18 | −0.12 | −0.38 | −0.32 | −0.50 |
253215_at | AT4G34950 | Major facilitator superfamily protein | −0.17 | −0.22 | −0.56 | −0.61 | −0.79 |
254080_at | AT4G25630 | fibrillarin 2 | 0.11 | 0.15 | −0.54 | −0.49 | −0.38 |
254563_at | AT4G19120 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | −0.16 | −0.01 | −0.56 | −0.42 | −0.58 |
254572_at | AT4G19380 | Long-chain fatty alcohol dehydrogenase family protein | 0.22 | 0.15 | −0.56 | −0.63 | −0.41 |
255300_at | AT4G04870 | cardiolipin synthase | 0.00 | 0.01 | −0.36 | −0.35 | −0.35 |
256036_at | AT1G07110 | fructose-2,6-bisphosphatase | −0.02 | −0.01 | −0.39 | −0.38 | −0.40 |
256741_at | AT3G29375 | XH domain-containing protein | 0.20 | 0.21 | −0.40 | −0.39 | −0.19 |
257315_at | AT3G30775 | Methylenetetrahydrofolate reductase family protein | −0.30 | −0.13 | −0.74 | −0.56 | −0.86 |
257516_at | AT1G69040 | ACT domain repeat 4 | −0.09 | −0.06 | −0.54 | −0.51 | −0.59 |
258232_at | AT3G27750 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR: AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-4; Plants-102; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | −0.08 | −0.09 | −0.35 | −0.37 | −0.45 |
258321_at | AT3G22840 | Chlorophyll A-B binding family protein | 0.33 | 0.54 | −1.01 | −0.80 | −0.47 |
258834_at | AT3G07270 | GTP cyclohydrolase I | −0.07 | −0.12 | −0.27 | −0.32 | −0.39 |
259258_at | AT3G07670 | Rubisco methyltransferase family protein | 0.08 | 0.06 | −0.33 | −0.35 | −0.26 |
261483_at | AT1G14270 | CAAX amino terminal protease family protein | −0.13 | −0.11 | −0.28 | −0.26 | −0.39 |
262703_at | AT1G16510 | SAUR-like auxin-responsive protein family | −0.09 | −0.17 | −0.31 | −0.39 | −0.47 |
262892_at | AT1G79440 | aldehyde dehydrogenase 5F1 | −0.03 | −0.08 | −0.36 | −0.41 | −0.44 |
263497_at | AT2G42540 | cold-regulated 15a | −0.26 | −0.30 | −0.68 | −0.72 | −0.98 |
264668_at | AT1G09780 | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | 0.10 | 0.08 | −0.49 | −0.51 | −0.41 |
264824_at | AT1G03420 | transposable element gene | −0.01 | 0.11 | −0.57 | −0.45 | −0.46 |
266778_at | AT2G29090 | cytochrome P450, family 707, subfamily A, polypeptide 2 | 0.23 | 0.46 | −0.90 | −0.66 | −0.43 |
267578_at | AT2G30695 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae-0; Bacteria-138; Metazoa-0; Fungi-0; Plants-40; Viruses-0; Other Eukaryotes-75 (source: NCBI BLink). | −0.05 | −0.10 | −0.33 | −0.38 | −0.43 |
ID | Locus | Description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
245216_at | AT4G16143 | importin alpha isoform 2 | 0.32 | −0.12 | 0.03 | −0.42 | −0.09 |
245904_at | AT5G11110 | sucrose phosphate synthase 2F | 0.61 | 0.12 | 0.29 | −0.20 | 0.41 |
248268_at | AT5G53480 | ARM repeat superfamily protein | 0.71 | 0.09 | 0.10 | −0.52 | 0.19 |
249953_at | AT5G18960 | FAR1-related sequence 12 | 0.62 | −0.07 | 0.22 | −0.47 | 0.15 |
249986_at | AT5G18460 | Protein of Unknown Function (DUF239) | 0.58 | −0.10 | 0.11 | −0.56 | 0.02 |
250155_at | AT5G15160 | BANQUO 2 | 0.88 | 0.63 | 0.16 | −0.09 | 0.79 |
250657_at | AT5G07000 | sulfotransferase 2B | 0.85 | 0.56 | 0.13 | −0.16 | 0.69 |
251012_at | AT5G02580 | Plant protein 1589 of unknown function | 0.77 | 0.43 | 0.18 | −0.17 | 0.61 |
251887_at | AT3G54170 | FKBP12 interacting protein 37 | 0.37 | 0.01 | 0.04 | −0.33 | 0.04 |
252549_at | AT3G45860 | cysteine-rich RLK (RECEPTOR-like protein kinase) 4 | 0.70 | 0.25 | 0.43 | −0.02 | 0.68 |
254341_at | AT4G22130 | STRUBBELIG-receptor family 8 | 0.50 | 0.03 | 0.05 | −0.42 | 0.08 |
254390_at | AT4G21940 | calcium-dependent protein kinase 15 | 0.49 | 0.28 | 0.12 | −0.09 | 0.40 |
254737_at | AT4G13840 | HXXXD-type acyl-transferase family protein | 0.58 | 0.02 | 0.09 | −0.47 | 0.11 |
256781_at | AT3G13650 | Disease resistance-responsive (dirigent-like protein) family protein | 0.71 | 0.16 | 0.13 | −0.42 | 0.29 |
257876_at | AT3G17130 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 0.53 | 0.13 | 0.31 | −0.08 | 0.45 |
258125_s_at | AT3G23530 | [AT3G23530, Cyclopropane-fatty-acyl-phospholipid synthase];[AT3G23510, Cyclopropane-fatty-acyl-phospholipid synthase] | 0.70 | 0.27 | −0.03 | −0.46 | 0.24 |
258270_at | AT3G15650 | alpha/beta-Hydrolases superfamily protein | 0.66 | −0.17 | 0.02 | −0.82 | −0.16 |
261917_at | AT1G65920 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | 0.79 | 0.39 | 0.25 | −0.15 | 0.64 |
264006_at | AT2G22430 | homeobox protein 6 | 0.85 | 0.11 | 0.63 | −0.11 | 0.74 |
264342_at | AT1G12080 | Vacuolar calcium-binding protein-related | 0.83 | 0.39 | 0.10 | −0.33 | 0.50 |
264400_at | AT1G61800 | glucose-6-phosphate/phosphate translocator 2 | 1.10 | 0.30 | 0.35 | −0.45 | 0.65 |
265393_at | AT2G20830 | transferases; folic acid binding | 0.39 | −0.15 | −0.05 | −0.59 | −0.20 |
265665_at | AT2G27420 | Cysteine proteinases superfamily protein | 1.20 | 0.22 | 0.22 | −0.76 | 0.44 |
266606_at | AT2G46310 | cytokinin response factor 5 | 0.68 | −0.01 | 0.29 | −0.40 | 0.27 |
267595_at | AT2G32990 | glycosyl hydrolase 9B8 | 0.80 | 0.19 | 0.07 | −0.54 | 0.26 |
ID | Locus | description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
245197_at | AT1G67800 | Copine (Calcium-dependent phospholipid-binding protein) family | 0.19 | 0.02 | −0.35 | −0.52 | −0.34 |
245265_at | AT4G14400 | ankyrin repeat family protein | 0.26 | −0.47 | −0.22 | −0.96 | −0.70 |
245346_at | AT4G17090 | chloroplast beta-amylase | 0.33 | 0.02 | −0.26 | −0.57 | −0.24 |
245367_at | AT4G16265 | RNA polymerases M/15 Kd subunit | 0.26 | 0.15 | −0.25 | −0.36 | −0.10 |
246464_at | AT5G16980 | Zinc-binding dehydrogenase family protein | 0.26 | −0.13 | −0.24 | −0.63 | −0.37 |
---|---|---|---|---|---|---|---|
246603_at | AT1G31690 | Copper amine oxidase family protein | 0.16 | −0.01 | −0.24 | −0.40 | −0.24 |
247191_at | AT5G65310 | homeobox protein 5 | 0.36 | 0.02 | −0.12 | −0.46 | −0.10 |
247348_at | AT5G63810 | beta-galactosidase 10 | 0.17 | 0.03 | −0.34 | −0.48 | −0.31 |
247541_at | AT5G61660 | glycine-rich protein | 0.30 | 0.13 | −0.48 | −0.66 | −0.36 |
247739_at | AT5G59240 | Ribosomal protein S8e family protein | 0.22 | −0.03 | −0.21 | −0.46 | −0.24 |
247814_at | AT5G58310 | methyl esterase 18 | 0.66 | 0.05 | −0.36 | −0.97 | −0.31 |
248075_at | AT5G55740 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.15 | −0.11 | −0.13 | −0.39 | −0.24 |
248169_at | AT5G54610 | ankyrin | 0.20 | −0.25 | −0.18 | −0.63 | −0.43 |
249266_at | AT5G41670 | 6-phosphogluconate dehydrogenase family protein | 0.27 | −0.06 | −0.11 | −0.44 | −0.17 |
249718_at | AT5G35740 | Carbohydrate-binding X8 domain superfamily protein | 0.14 | −0.02 | −0.48 | −0.63 | −0.50 |
250445_at | AT5G10760 | Eukaryotic aspartyl protease family protein | 0.11 | −0.11 | −0.49 | −0.71 | −0.60 |
250503_at | AT5G09820 | Plastid-lipid associated protein PAP/fibrillin family protein | 0.14 | −0.02 | −0.21 | −0.37 | −0.23 |
251155_at | AT3G63160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-26; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.11 | −0.02 | −0.42 | −0.55 | −0.44 |
251319_at | AT3G61610 | Galactose mutarotase-like superfamily protein | 0.24 | 0.12 | −0.35 | −0.48 | −0.23 |
251705_at | AT3G56400 | WRKY DNA-binding protein 70 | 0.13 | −0.53 | −0.15 | −0.80 | −0.67 |
251789_at | AT3G55450 | PBS1-like 1 | 0.18 | 0.07 | −0.26 | −0.37 | −0.20 |
252387_at | AT3G47800 | Galactose mutarotase-like superfamily protein | 0.25 | −0.30 | −0.02 | −0.58 | −0.32 |
252607_at | AT3G44990 | xyloglucan endo-transglycosylase-related 8 | 0.56 | −0.02 | −0.38 | −0.95 | −0.40 |
252828_at | AT4G39960 | Molecular chaperone Hsp40/DnaJ family protein | 0.29 | 0.08 | −0.33 | −0.54 | −0.25 |
253005_at | AT4G38100 | unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae-12; Bacteria-1396; Metazoa-17338; Fungi-3422; Plants-5037; Viruses-0; Other Eukaryotes-2996 (source: NCBI BLink). | 0.10 | 0.02 | −0.36 | −0.45 | −0.35 |
253209_at | AT4G34830 | Pentatricopeptide repeat (PPR) superfamily protein | 0.40 | 0.09 | −0.12 | −0.43 | −0.03 |
253396_at | AT4G32720 | La protein 1 | 0.43 | 0.04 | −0.08 | −0.47 | −0.04 |
253518_at | AT4G31400 | damaged DNA binding; DNA-directed DNA polymerases | 0.07 | −0.07 | −0.22 | −0.36 | −0.29 |
254016_at | AT4G26150 | cytokinin-responsive gata factor 1 | 0.13 | −0.08 | −0.35 | −0.56 | −0.43 |
254641_at | AT4G18800 | RAB GTPase homolog A1D | 0.31 | 0.09 | −0.19 | −0.41 | −0.10 |
254723_at | AT4G13510 | ammonium transporter 1;1 | 0.10 | −0.12 | −0.18 | −0.40 | −0.30 |
254870_at | AT4G11900 | S-locus lectin protein kinase family protein | 0.30 | 0.00 | −0.13 | −0.43 | −0.13 |
255278_at | AT4G04940 | transducin family protein/WD-40 repeat family protein | 0.23 | −0.11 | −0.12 | −0.46 | −0.23 |
256052_at | AT1G06960 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.17 | 0.05 | −0.31 | −0.43 | −0.26 |
---|---|---|---|---|---|---|---|
256091_at | AT1G20693 | high mobility group B2 | 0.04 | −0.09 | −0.33 | −0.46 | −0.42 |
256617_at | AT3G22240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae-0; Bacteria-0; Metazoa-0; Fungi-0; Plants-177; Viruses-0; Other Eukaryotes-0 (source: NCBI BLink). | 0.31 | −0.20 | −0.22 | −0.73 | −0.42 |
256766_at | AT3G22231 | pathogen and circadian controlled 1 | 0.38 | −0.33 | −0.36 | −1.07 | −0.69 |
257180_at | AT3G13180 | NOL1/NOP2/sun family protein/antitermination NusB domain-containing protein | 0.01 | −0.09 | −0.32 | −0.42 | −0.41 |
257382_at | AT2G40750 | WRKY DNA-binding protein 54 | 0.44 | −0.56 | −0.23 | −1.23 | −0.79 |
257763_s_at | AT3G23120 | [AT3G23120, receptor like protein 38]; [AT3G23110, receptor like protein 37] | 0.46 | −0.05 | −0.08 | −0.59 | −0.13 |
257926_at | AT3G23280 | XB3 ortholog 5 in Arabidopsis thaliana | 0.06 | 0.00 | −0.26 | −0.32 | −0.26 |
258293_at | AT3G23430 | phosphate 1 | 0.24 | −0.27 | 0.09 | −0.43 | −0.19 |
258447_at | AT3G22450 | Ribosomal L18p/L5e family protein | 0.11 | −0.27 | −0.05 | −0.43 | −0.32 |
258554_at | AT3G06980 | DEA(D/H)-box RNA helicase family protein | 0.33 | −0.04 | −0.03 | −0.40 | −0.07 |
258633_at | AT3G07990 | serine carboxypeptidase-like 27 | 0.29 | 0.04 | −0.19 | −0.44 | −0.15 |
258742_at | AT3G05800 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 | 0.38 | 0.07 | −0.15 | −0.46 | −0.07 |
258956_at | AT3G01440 | PsbQ-like 1 | 0.04 | −0.13 | −0.34 | −0.52 | −0.48 |
259466_at | AT1G19050 | response regulator 7 | 0.18 | −0.05 | −0.31 | −0.54 | −0.36 |
259561_at | AT1G21250 | cell wall-associated kinase | 0.31 | −0.34 | −0.22 | −0.87 | −0.57 |
259891_at | AT1G72730 | DEA(D/H)-box RNA helicase family protein | 0.20 | 0.07 | −0.27 | −0.40 | −0.20 |
260211_at | AT1G74440 | Protein of unknown function (DUF962) | 0.02 | −0.29 | −0.17 | −0.49 | −0.46 |
260522_x_at | AT2G41730 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−25; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.02 | −0.50 | −0.34 | −0.85 | −0.84 |
260560_at | AT2G43590 | Chitinase family protein | −0.04 | −0.29 | −1.01 | −1.26 | −1.30 |
260837_at | AT1G43670 | Inositol monophosphatase family protein | 0.18 | 0.05 | −0.29 | −0.42 | −0.24 |
261046_at | AT1G01390 | UDP-Glycosyltransferase superfamily protein | 0.67 | 0.31 | −0.37 | −0.73 | −0.06 |
261226_at | AT1G20190 | expansin 11 | 0.34 | 0.08 | −0.44 | −0.70 | −0.36 |
261339_at | AT1G35710 | Protein kinase family protein with leucine-rich repeat domain | 0.29 | −0.14 | −0.36 | −0.80 | −0.50 |
261651_at | AT1G27760 | Interferon-related developmental regulator family protein/IFRD protein family | 0.14 | 0.02 | −0.25 | −0.38 | −0.24 |
262212_at | AT1G74890 | response regulator 15 | 0.10 | −0.09 | −0.18 | −0.37 | −0.26 |
262374_s_at | AT1G72910 | [AT1G72910, Toll-Interleukin-Resistance (TIR) domain-containing protein];[AT1G72930, toll/interleukin-1 receptor-like] | 0.10 | −0.13 | −0.42 | −0.64 | −0.55 |
262518_at | AT1G17170 | glutathione S-transferase TAU 24 | 0.33 | −0.14 | −0.49 | −0.96 | −0.63 |
262634_at | AT1G06690 | NAD(P)-linked oxidoreductase superfamily protein | 0.02 | −0.06 | −0.31 | −0.39 | −0.37 |
262766_at | AT1G13160 | ARM repeat superfamily protein | 0.19 | −0.06 | −0.07 | −0.33 | −0.13 |
262797_at | AT1G20840 | tonoplast monosaccharide transporter1 | 0.08 | −0.01 | −0.27 | −0.36 | −0.28 |
---|---|---|---|---|---|---|---|
263133_at | AT1G78450 | SOUL heme-binding family protein | 0.72 | 0.07 | −0.21 | −0.86 | −0.14 |
263221_at | AT1G30620 | NAD(P)-binding Rossmann-fold superfamily protein | 0.23 | −0.06 | −0.11 | −0.41 | −0.17 |
263493_at | AT2G42520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 0.47 | 0.11 | −0.05 | −0.42 | 0.06 |
263705_at | AT1G31190 | Myo-inositol monophosphatase like 1 | 0.13 | −0.06 | −0.23 | −0.42 | −0.29 |
263776_s_at | AT2G46440 | [AT2G46440, cyclic nucleotide-gated channels]; [AT2G46430, cyclic nucleotide gated channel 3] | 0.23 | −0.06 | −0.32 | −0.60 | −0.37 |
263842_at | AT2G36835 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−26; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.04 | −0.05 | −0.37 | −0.47 | −0.42 |
263951_at | AT2G35960 | NDR1/HIN1-like 12 | 0.09 | 0.02 | −0.36 | −0.43 | −0.34 |
264071_at | AT2G27920 | serine carboxypeptidase-like 51 | 0.57 | 0.30 | −0.20 | −0.47 | 0.09 |
264577_at | AT1G05260 | Peroxidase superfamily protein | 0.53 | −0.34 | 0.19 | −0.67 | −0.14 |
264748_at | AT1G70070 | DEAD/DEAH box helicase, putative | 0.22 | 0.04 | −0.22 | −0.40 | −0.18 |
264771_at | AT1G22940 | thiamin biosynthesis protein, putative | 0.31 | 0.00 | −0.07 | −0.38 | −0.07 |
265560_at | AT2G05520 | glycine-rich protein 3 | 0.06 | −0.15 | −0.21 | −0.42 | −0.36 |
265611_at | AT2G25510 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−2; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.14 | −0.11 | −0.27 | −0.52 | −0.37 |
265837_at | AT2G14560 | Protein of unknown function (DUF567) | 0.45 | −0.47 | −0.99 | −1.91 | −1.46 |
265886_at | AT2G25620 | DNA-binding protein phosphatase 1 | 0.41 | 0.19 | −0.21 | −0.43 | −0.02 |
266078_at | AT2G40670 | response regulator 16 | 0.60 | 0.22 | −0.33 | −0.72 | −0.11 |
266464_at | AT2G47800 | multidrug resistance-associated protein 4 | 0.30 | 0.07 | −0.16 | −0.39 | −0.09 |
266479_at | AT2G31160 | Protein of unknown function (DUF640) | 0.35 | −0.01 | −0.09 | −0.44 | −0.10 |
266578_at | AT2G23910 | NAD(P)-binding Rossmann-fold superfamily protein | 0.25 | −0.52 | −0.17 | −0.93 | −0.69 |
266951_at | AT2G18940 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.22 | −0.05 | −0.24 | −0.52 | −0.30 |
267076_at | AT2G41090 | Calcium-binding EF-hand family protein | 0.28 | −0.32 | −0.15 | −0.76 | −0.47 |
267138_s_at | AT2G38230 | [AT2G38230, pyridoxine biosynthesis 1.1]; [AT2G38210, putative PDX1-like protein 4] | 0.07 | −0.12 | −0.34 | −0.54 | −0.47 |
267592_at | AT2G39710 | Eukaryotic aspartyl protease family protein | 0.10 | −0.16 | −0.13 | −0.40 | −0.29 |
ID | Locus | description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
244951_s_at | AT2G07723 | [AT2G07723, pseudogene, similar to orf454~homology with two ORFs from Marchantia polymorpha mtDNA (orf169 and orf322), high similarity to 3'-terminal part of ccl1 of Rhodobacter, blastp match of 76% identity and 3.4e−193 P-value to GP|459537|emb|CAA54966.1||X78036 orf454~homology with two ORFs from Marchantia polymorpha mtDNA (orf169 and orf322), high similarity to 3'-terminal part of ccl1 of Rhodobacter {Oenothera berteriana}]; [ATMG00180, cytochrome C biogenesis 452] | 0.16 | 0.19 | 0.30 | 0.33 | 0.49 |
245627_at | AT1G56600 | galactinol synthase 2 | 0.38 | 0.24 | 0.67 | 0.53 | 0.91 |
---|---|---|---|---|---|---|---|
245792_at | AT1G32100 | pinoresinol reductase 1 | 0.09 | 0.14 | 0.27 | 0.31 | 0.40 |
245903_at | AT5G11100 | Calcium-dependent lipid-binding (CaLB domain) family protein | 0.21 | 0.24 | 0.31 | 0.34 | 0.55 |
246425_at | AT5G17420 | Cellulose synthase family protein | 0.24 | 0.29 | 0.30 | 0.36 | 0.60 |
246540_at | AT5G15600 | SPIRAL1-like4 | 0.13 | 0.13 | 0.25 | 0.25 | 0.39 |
247035_at | AT5G67110 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | 0.11 | 0.47 | 0.55 | 0.57 |
247295_at | AT5G64180 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae−0; Bacteria−0; Metazoa−736; Fungi−347; Plants−385; Viruses−0; Other Eukaryotes−339 (source: NCBI BLink). | 0.26 | 0.17 | 0.42 | 0.34 | 0.59 |
249035_at | AT5G44190 | GOLDEN2-like 2 | 0.11 | 0.15 | 0.32 | 0.36 | 0.47 |
249408_at | AT5G40330 | myb domain protein 23 | 0.16 | 0.13 | 0.45 | 0.41 | 0.57 |
250926_at | AT5G03555 | permease, cytosine/purines, uracil, thiamine, allantoin family protein | 0.16 | 0.18 | 0.24 | 0.26 | 0.42 |
251069_at | AT5G01930 | Glycosyl hydrolase superfamily protein | 0.19 | 0.26 | 0.26 | 0.33 | 0.52 |
252429_at | AT3G47500 | cycling DOF factor 3 | 0.12 | 0.22 | 0.20 | 0.29 | 0.42 |
253277_at | AT4G34230 | cinnamyl alcohol dehydrogenase 5 | 0.18 | 0.16 | 0.34 | 0.32 | 0.50 |
254153_at | AT4G24450 | phosphoglucan, water dikinase | 0.13 | 0.29 | 0.37 | 0.53 | 0.66 |
254574_at | AT4G19430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.75 | 1.68 | 1.48 | 2.42 | 3.16 |
254633_at | AT4G18640 | Leucine-rich repeat protein kinase family protein | 0.09 | 0.22 | 0.30 | 0.43 | 0.52 |
257017_at | AT3G19620 | Glycosyl hydrolase family protein | 0.33 | 0.40 | 0.43 | 0.51 | 0.83 |
257896_at | AT3G16920 | Chitinase-like protein 2 | 0.15 | 0.13 | 0.40 | 0.39 | 0.53 |
258038_at | AT3G21260 | Glycolipid transfer protein (GLTP) family protein | 0.07 | 0.09 | 0.36 | 0.38 | 0.45 |
258647_at | AT3G07870 | F-box and associated interaction domains-containing protein | 0.15 | 0.08 | 0.30 | 0.23 | 0.38 |
258935_at | AT3G10120 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−57; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.21 | 0.16 | 0.49 | 0.44 | 0.65 |
259142_at | AT3G10200 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.08 | 0.16 | 0.24 | 0.32 | 0.40 |
259564_at | AT1G20540 | Transducin/WD40 repeat-like superfamily protein | 0.09 | 0.16 | 0.17 | 0.24 | 0.33 |
259934_at | AT1G71340 | PLC-like phosphodiesterases superfamily protein | −0.01 | 0.09 | 0.23 | 0.32 | 0.32 |
260902_at | AT1G21440 | Phosphoenolpyruvate carboxylase family protein | 0.16 | 0.11 | 0.27 | 0.23 | 0.39 |
261109_at | AT1G75450 | cytokinin oxidase 5 | 0.20 | 0.26 | 0.24 | 0.30 | 0.51 |
261272_at | AT1G26665 | Mediator complex, subunit Med10 | 0.16 | 0.11 | 0.29 | 0.25 | 0.40 |
262357_at | AT1G73040 | Mannose-binding lectin superfamily protein | 0.16 | 0.21 | 0.58 | 0.64 | 0.79 |
262796_at | AT1G20850 | xylem cysteine peptidase 2 | 0.20 | 0.20 | 0.41 | 0.41 | 0.60 |
264255_at | AT1G09140 | SERINE-ARGININE PROTEIN 30 | 0.05 | 0.15 | 0.36 | 0.46 | 0.51 |
264873_at | AT1G24100 | UDP-glucosyl transferase 74B1 | 0.08 | 0.08 | 0.38 | 0.38 | 0.45 |
265510_at | AT2G05630 | Ubiquitin-like superfamily protein | 0.20 | 0.13 | 0.35 | 0.28 | 0.48 |
265902_at | AT2G25590 | Plant Tudor-like protein | 0.12 | 0.10 | 0.52 | 0.50 | 0.63 |
ID | Locus | description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
245275_at | AT4G15210 | beta-amylase 5 | 0.15 | −0.66 | 1.93 | 1.12 | 1.27 |
245422_at | AT4G17470 | alpha/beta-Hydrolases superfamily protein | 0.38 | −0.33 | 1.51 | 0.80 | 1.17 |
245465_at | AT4G16590 | cellulose synthase-like A01 | −0.02 | −0.48 | 1.58 | 1.12 | 1.10 |
245928_s_at | AT5G24770 | [AT5G24770, vegetative storage protein 2]; [AT5G24780, vegetative storage protein 1] | −0.30 | −0.39 | 1.49 | 1.40 | 1.10 |
246884_at | AT5G26220 | ChaC-like family protein | −0.26 | −0.34 | 0.89 | 0.81 | 0.55 |
246944_at | AT5G25450 | Cytochrome bd ubiquinol oxidase, 14kDa subunit | −0.11 | −0.33 | 0.70 | 0.48 | 0.37 |
247293_at | AT5G64510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae−798; Bacteria−22429; Metazoa−974; Fungi−991; Plants−531; Viruses−0; Other Eukaryotes−9610 (source: NCBI BLink). | −0.08 | −0.10 | 0.71 | 0.68 | 0.60 |
247657_at | AT5G59845 | Gibberellin-regulated family protein | 0.11 | 0.05 | 0.42 | 0.35 | 0.47 |
248091_at | AT5G55120 | galactose-1-phosphate guanylyltransferase (GDP)s; GDP-D-glucose phosphorylases; quercetin 4'-O-glucosyltransferases | 0.16 | −0.03 | 0.42 | 0.23 | 0.39 |
248332_at | AT5G52640 | heat shock protein 90.1 | 0.17 | −0.24 | 1.77 | 1.36 | 1.53 |
248434_at | AT5G51440 | HSP20-like chaperones superfamily protein | −0.07 | −0.53 | 1.02 | 0.57 | 0.49 |
248657_at | AT5G48570 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | 0.13 | −0.13 | 1.47 | 1.22 | 1.34 |
248676_at | AT5G48850 | Tetratricopeptide repeat (TPR)-like superfamily protein | −0.13 | −0.38 | 1.08 | 0.84 | 0.70 |
248802_at | AT5G47435 | formyltetrahydrofolate deformylase, putative | −0.03 | 0.00 | 0.42 | 0.44 | 0.42 |
249774_at | AT5G24150 | FAD/NAD(P)-binding oxidoreductase family protein | 0.05 | −0.03 | 0.57 | 0.49 | 0.54 |
249775_at | AT5G24160 | squalene monoxygenase 6 | −0.08 | −0.25 | 0.63 | 0.46 | 0.38 |
249866_at | AT5G23010 | methylthioalkylmalate synthase 1 | 0.14 | 0.02 | 0.33 | 0.21 | 0.35 |
250304_at | AT5G12110 | Glutathione S-transferase, C-terminal-like; Translation elongation factor EF1B/ribosomal protein S6 | 0.07 | −0.15 | 1.34 | 1.11 | 1.18 |
250793_at | AT5G05600 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | −0.35 | −0.43 | 1.21 | 1.13 | 0.78 |
251028_at | AT5G02230 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | 0.23 | −0.04 | 0.71 | 0.44 | 0.67 |
251770_at | AT3G55970 | jasmonate-regulated gene 21 | 0.00 | −0.65 | 1.31 | 0.66 | 0.66 |
252114_at | AT3G51450 | Calcium-dependent phosphotriesterase superfamily protein | 0.21 | −0.18 | 0.75 | 0.36 | 0.57 |
252265_at | AT3G49620 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.14 | −0.40 | 1.42 | 0.88 | 1.02 |
252363_at | AT3G48460 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.19 | −0.10 | 0.50 | 0.21 | 0.40 |
252677_at | AT3G44320 | nitrilase 3 | 0.21 | −0.20 | 0.64 | 0.23 | 0.44 |
253332_at | AT4G33420 | Peroxidase superfamily protein | −0.02 | −0.17 | 0.89 | 0.74 | 0.72 |
253519_at | AT4G31240 | protein kinase C-like zinc finger protein | 0.20 | −0.13 | 0.59 | 0.26 | 0.46 |
253640_at | AT4G30630 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−33; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.21 | 0.09 | 0.33 | 0.21 | 0.42 |
---|---|---|---|---|---|---|---|
253697_at | AT4G29700 | Alkaline-phosphatase-like family protein | 0.47 | −0.11 | 0.72 | 0.15 | 0.61 |
253842_at | AT4G27860 | vacuolar iron transporter (VIT) family protein | 0.00 | −0.30 | 0.66 | 0.36 | 0.36 |
254234_at | AT4G23680 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 0.53 | −0.06 | 1.17 | 0.58 | 1.11 |
254385_s_at | AT4G21830 | [AT4G21830, methionine sulfoxide reductase B7]; [AT4G21840, methionine sulfoxide reductase B8] | −0.14 | −0.53 | 0.87 | 0.48 | 0.34 |
254839_at | AT4G12400 | stress-inducible protein, putative | −0.09 | 0.00 | 0.79 | 0.89 | 0.79 |
254848_at | AT4G11960 | PGR5-like B | −0.06 | −0.06 | 0.58 | 0.58 | 0.52 |
255283_at | AT4G04620 | Ubiquitin-like superfamily protein | −0.01 | −0.08 | 0.43 | 0.36 | 0.35 |
255786_at | AT1G19670 | chlorophyllase 1 | 0.09 | −0.22 | 0.89 | 0.58 | 0.67 |
255793_at | AT2G33250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04310.1); Has 41 Blast hits to 41 proteins in 12 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−41; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.03 | −0.03 | 0.35 | 0.36 | 0.33 |
256178_s_at | AT1G51760 | [AT1G51760, peptidase M20/M25/M40 family protein];[AT1G51780, IAA-leucine resistant (ILR)-like gene 5] | 0.21 | −0.02 | 0.59 | 0.36 | 0.57 |
256245_at | AT3G12580 | heat shock protein 70 | 0.43 | −0.34 | 2.35 | 1.58 | 2.01 |
256433_at | AT3G10985 | senescence associated gene 20 | 0.03 | 0.01 | 0.58 | 0.55 | 0.58 |
256603_at | AT3G28270 | Protein of unknown function (DUF677) | 0.58 | −0.28 | 1.05 | 0.18 | 0.76 |
257239_at | no_match | no_match | −0.06 | −0.09 | 0.65 | 0.63 | 0.57 |
257339_s_at | ATMG00040 | [ATMG00040, ATP synthase subunit C family protein];[AT2G07671, ATP synthase subunit C family protein];[ATMG01080, mitochondrial F0-ATPase subunit 9] | 0.23 | −0.08 | 0.72 | 0.40 | 0.64 |
257421_at | AT1G12030 | Protein of unknown function (DUF506) | 0.09 | −0.20 | 0.97 | 0.67 | 0.77 |
257830_at | AT3G26690 | nudix hydrolase homolog 13 | 0.25 | 0.02 | 0.55 | 0.31 | 0.57 |
257890_s_at | AT3G42570 | [AT3G42570, peroxidase family protein]; [AT3G17070, Peroxidase family protein] | 0.30 | −0.06 | 0.61 | 0.25 | 0.55 |
258133_at | AT3G24500 | multiprotein bridging factor 1C | 0.11 | −0.22 | 1.49 | 1.16 | 1.27 |
258263_at | AT3G15780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−20; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.06 | −0.02 | 0.43 | 0.34 | 0.41 |
258815_at | AT3G04000 | NAD(P)-binding Rossmann-fold superfamily protein | 0.10 | 0.03 | 0.41 | 0.34 | 0.44 |
258990_at | AT3G08840 | D-alanine―D-alanine ligase family | 0.11 | −0.21 | 0.55 | 0.23 | 0.34 |
259042_at | AT3G03450 | RGA-like 2 | 0.21 | 0.04 | 0.52 | 0.35 | 0.56 |
259802_at | AT1G72260 | thionin 2.1 | −0.25 | −0.27 | 1.04 | 1.02 | 0.77 |
260004_at | AT1G67860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67865.1); Has 13 Blast hits to 13 proteins in 2 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−13; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.01 | −0.09 | 0.48 | 0.40 | 0.39 |
---|---|---|---|---|---|---|---|
260248_at | AT1G74310 | heat shock protein 101 | 0.21 | 0.01 | 0.60 | 0.39 | 0.60 |
261081_at | AT1G07350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | 0.03 | 0.68 | 0.68 | 0.71 |
261713_at | AT1G32640 | Basic helix-loop-helix (bHLH) DNA-binding family protein | 0.26 | −0.19 | 0.72 | 0.28 | 0.53 |
262354_at | AT1G64200 | vacuolar H+-ATPase subunit E isoform 3 | 0.03 | −0.20 | 0.74 | 0.51 | 0.54 |
262608_at | AT1G14120 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.25 | −0.21 | 1.20 | 0.74 | 0.99 |
262637_at | AT1G06640 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.13 | −0.15 | 0.70 | 0.41 | 0.55 |
262884_at | AT1G64720 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 0.03 | −0.26 | 0.75 | 0.45 | 0.49 |
263150_at | AT1G54050 | HSP20-like chaperones superfamily protein | 0.21 | −0.10 | 0.55 | 0.24 | 0.45 |
263161_at | AT1G54020 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.30 | −0.50 | 1.73 | 0.93 | 1.23 |
263374_at | AT2G20560 | DNAJ heat shock family protein | 0.24 | −0.38 | 1.19 | 0.57 | 0.81 |
263539_at | AT2G24850 | tyrosine aminotransferase 3 | −0.08 | −0.20 | 0.82 | 0.70 | 0.62 |
263866_at | AT2G36950 | Heavy metal transport/detoxification superfamily protein | −0.07 | −0.10 | 0.38 | 0.36 | 0.29 |
263972_at | AT2G42760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae−0; Bacteria−1; Metazoa−26; Fungi−10; Plants−107; Viruses−0; Other Eukaryotes−26 (source: NCBI BLink). | −0.09 | −0.16 | 0.50 | 0.43 | 0.34 |
264514_at | AT1G09500 | NAD(P)-binding Rossmann-fold superfamily protein | 0.30 | 0.10 | 0.54 | 0.34 | 0.65 |
265122_at | AT1G62540 | flavin-monooxygenase glucosinolate S-oxygenase 2 | 0.49 | 0.09 | 0.74 | 0.35 | 0.83 |
265233_s_at | ATMG00590 | [ATMG00590, Cytochrome b/b6 protein]; [AT2G07718, Cytochrome b/b6 protein] | 0.04 | −0.15 | 0.61 | 0.42 | 0.46 |
265572_at | no_match | no_match | −0.20 | −0.29 | 0.45 | 0.37 | 0.17 |
266005_at | AT2G37340 | arginine/serine-rich zinc knuckle-containing protein 33 | 0.06 | 0.01 | 0.34 | 0.29 | 0.35 |
266142_at | AT2G39030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | −0.63 | −1.59 | 3.01 | 2.05 | 1.42 |
266368_at | AT2G41380 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.35 | −0.13 | 0.84 | 0.37 | 0.72 |
266555_at | AT2G46270 | G-box binding factor 3 | 0.29 | 0.05 | 0.76 | 0.52 | 0.81 |
266589_at | AT2G46250 | myosin heavy chain-related | 0.00 | −0.24 | 0.77 | 0.54 | 0.54 |
266614_at | AT2G14910 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in 102 species: Archae−0; Bacteria−300; Metazoa−25; Fungi−0; Plants−89; Viruses−0; Other Eukaryotes−191 (source: NCBI BLink). | 0.05 | −0.08 | 0.56 | 0.43 | 0.48 |
266988_at | AT2G39310 | jacalin-related lectin 22 | 0.21 | 0.02 | 0.52 | 0.33 | 0.54 |
266989_at | AT2G39330 | jacalin-related lectin 23 | −0.04 | −0.13 | 1.55 | 1.45 | 1.42 |
267336_at | AT2G19310 | HSP20-like chaperones superfamily protein | 0.09 | −0.16 | 0.52 | 0.27 | 0.36 |
267425_at | AT2G34810 | FAD-binding Berberine family protein | −0.02 | −0.50 | 1.23 | 0.75 | 0.73 |
ID | Locus | description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
245001_at | ATCG00220 | photosystem II reaction center protein M | −0.43 | 0.05 | −0.05 | 0.42 | 0.00 |
245449_at | AT4G16870 | transposable element gene | −0.08 | 0.01 | 0.31 | 0.40 | 0.33 |
245602_at | AT4G14270 | Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. | −0.23 | −0.05 | 0.22 | 0.41 | 0.18 |
245734_at | AT1G73480 | alpha/beta-Hydrolases superfamily protein | −0.47 | −0.05 | 0.23 | 0.65 | 0.18 |
245864_at | AT1G58070 | unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae−2; Bacteria−25; Metazoa−90; Fungi−19; Plants−78; Viruses−4; Other Eukaryotes−68 (source: NCBI BLink). | −0.08 | 0.20 | 0.19 | 0.46 | 0.38 |
247356_at | AT5G63800 | Glycosyl hydrolase family 35 protein | −0.37 | −0.05 | 0.14 | 0.46 | 0.09 |
247452_at | AT5G62430 | cycling DOF factor 1 | 0.03 | 0.19 | 0.24 | 0.40 | 0.42 |
247509_at | AT5G62020 | heat shock transcription factor B2A | −0.20 | 0.07 | 0.13 | 0.40 | 0.20 |
247638_at | AT5G60490 | FASCICLIN-like arabinogalactan-protein 12 | −0.04 | 0.21 | 0.19 | 0.44 | 0.40 |
247899_at | AT5G57345 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae-12; Bacteria-1396; Metazoa-17338; Fungi-3422; Plants-5037; Viruses-0; Other Eukaryotes-2996 (source: NCBI BLink). | −0.30 | −0.13 | 0.28 | 0.45 | 0.15 |
248382_at | AT5G51890 | Peroxidase superfamily protein | −0.13 | 0.06 | 0.45 | 0.64 | 0.51 |
248793_at | AT5G47240 | nudix hydrolase homolog 8 | −0.52 | −0.25 | 0.18 | 0.45 | −0.07 |
249265_at | AT5G41700 | ubiquitin conjugating enzyme 8 | −0.12 | 0.05 | 0.22 | 0.39 | 0.27 |
249439_at | AT5G40020 | Pathogenesis-related thaumatin superfamily protein | −0.09 | 0.06 | 0.55 | 0.71 | 0.61 |
250183_at | AT5G14510 | ARM repeat superfamily protein | −0.17 | 0.11 | 0.19 | 0.47 | 0.30 |
250478_at | AT5G10250 | Phototropic-responsive NPH3 family protein | −0.15 | 0.18 | 0.11 | 0.44 | 0.29 |
251257_at | AT3G62290 | ADP-ribosylation factor A1E | −0.21 | −0.17 | 0.34 | 0.38 | 0.17 |
251324_at | AT3G61430 | plasma membrane intrinsic protein 1A | −0.45 | −0.18 | 0.10 | 0.37 | −0.08 |
251962_at | AT3G53420 | plasma membrane intrinsic protein 2A | −0.23 | −0.10 | 0.22 | 0.35 | 0.12 |
253263_at | AT4G34000 | abscisic acid responsive elements-binding factor 3 | −0.12 | 0.14 | 0.29 | 0.55 | 0.43 |
253270_at | AT4G34160 | CYCLIN D3;1 | −0.06 | 0.11 | 0.20 | 0.37 | 0.31 |
254239_at | AT4G23400 | plasma membrane intrinsic protein 1;5 | −0.23 | 0.07 | 0.31 | 0.61 | 0.38 |
254327_at | AT4G22490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.09 | 0.24 | 0.28 | 0.60 | 0.51 |
254564_at | AT4G19170 | nine-cis-epoxycarotenoid dioxygenase 4 | −0.25 | −0.09 | 0.33 | 0.48 | 0.24 |
254688_at | AT4G13830 | DNAJ-like 20 | −0.28 | −0.01 | 0.31 | 0.58 | 0.30 |
254691_at | AT4G17840 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | −0.30 | −0.01 | 0.24 | 0.53 | 0.23 |
255469_at | AT4G03030 | Galactose oxidase/kelch repeat superfamily protein | −0.15 | 0.08 | 0.16 | 0.38 | 0.23 |
---|---|---|---|---|---|---|---|
255602_at | AT4G01026 | PYR1-like 7 | −0.42 | −0.11 | 0.16 | 0.47 | 0.05 |
255626_at | AT4G00780 | TRAF-like family protein | −0.04 | 0.15 | 0.23 | 0.42 | 0.38 |
256096_at | AT1G13650 | BEST Arabidopsis thaliana protein match is: 18S pre−ribosomal assembly protein gar2−related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae−22; Bacteria−222; Metazoa−684; Fungi−292; Plants−62; Viruses−14; Other Eukaryotes−2392 (source: NCBI BLink). | −0.42 | −0.31 | 0.54 | 0.65 | 0.23 |
256454_at | AT1G75280 | NmrA-like negative transcriptional regulator family protein | −0.22 | −0.02 | 0.27 | 0.47 | 0.25 |
256527_at | AT1G66100 | Plant thionin | −0.95 | −0.55 | 0.14 | 0.55 | −0.41 |
256789_at | AT3G13672 | TRAF-like superfamily protein | −0.37 | −0.01 | 0.08 | 0.44 | 0.07 |
257021_at | AT3G19710 | branched-chain aminotransferase4 | −0.12 | −0.04 | 0.36 | 0.43 | 0.31 |
257422_at | AT1G11940 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | −0.14 | 0.10 | 0.12 | 0.36 | 0.22 |
257615_at | AT3G26510 | Octicosapeptide/Phox/Bem1p family protein | −0.13 | −0.06 | 0.38 | 0.45 | 0.32 |
257628_at | AT3G26290 | cytochrome P450, family 71, subfamily B, polypeptide 26 | −0.36 | −0.05 | 0.25 | 0.56 | 0.20 |
258124_at | AT3G18215 | Protein of unknown function, DUF599 | −0.22 | −0.12 | 0.37 | 0.47 | 0.25 |
258188_at | AT3G17800 | Protein of unknown function (DUF760) | −0.09 | 0.12 | 0.21 | 0.42 | 0.32 |
258890_at | AT3G05690 | nuclear factor Y, subunit A2 | 0.01 | 0.23 | 0.21 | 0.44 | 0.44 |
259015_at | AT3G07350 | Protein of unknown function (DUF506) | −0.35 | −0.12 | 0.35 | 0.58 | 0.23 |
259022_at | AT3G07420 | asparaginyl-tRNA synthetase 2 | −0.13 | 0.19 | 0.03 | 0.35 | 0.23 |
259441_at | AT1G02300 | Cysteine proteinases superfamily protein | −0.05 | 0.13 | 0.28 | 0.46 | 0.41 |
259544_at | AT1G20620 | catalase 3 | −0.41 | −0.10 | 0.28 | 0.58 | 0.18 |
259666_at | AT1G55310 | SC35-like splicing factor 33 | −0.14 | 0.01 | 0.30 | 0.45 | 0.31 |
259766_at | AT1G64360 | unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−6; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.13 | 0.02 | 0.55 | 0.71 | 0.58 |
260169_at | AT1G71990 | fucosyltransferase 13 | −0.11 | −0.05 | 0.30 | 0.36 | 0.26 |
260431_at | AT1G68190 | B-box zinc finger family protein | −0.35 | −0.03 | 0.22 | 0.55 | 0.19 |
261026_at | AT1G01240 | unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae−0; Bacteria−2; Metazoa−11; Fungi−0; Plants−80; Viruses−0; Other Eukaryotes−2 (source: NCBI BLink). | −0.46 | 0.00 | 0.03 | 0.49 | 0.03 |
261276_at | AT1G26670 | Vesicle transport v-SNARE family protein | −0.05 | 0.05 | 0.31 | 0.42 | 0.36 |
261315_at | AT1G53170 | ethylene response factor 8 | −0.21 | −0.07 | 0.21 | 0.35 | 0.14 |
261845_at | AT1G15960 | NRAMP metal ion transporter 6 | −0.42 | 0.06 | 0.10 | 0.59 | 0.16 |
261887_at | AT1G80780 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | −0.19 | −0.12 | 0.29 | 0.36 | 0.17 |
---|---|---|---|---|---|---|---|
262113_at | AT1G02820 | Late embryogenesis abundant 3 (LEA3) family protein | −1.09 | −0.37 | −0.08 | 0.65 | −0.44 |
262399_at | AT1G49500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−24; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.65 | −0.25 | 0.00 | 0.41 | −0.24 |
262607_at | AT1G13990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 25 Blast hits to 25 proteins in 8 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−25; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.28 | 0.02 | 0.46 | 0.76 | 0.48 |
262826_at | AT1G13080 | cytochrome P450, family 71, subfamily B, polypeptide 2 | −0.27 | −0.15 | 0.44 | 0.56 | 0.29 |
262844_at | AT1G14890 | Plant invertase/pectin methylesterase inhibitor superfamily protein | −0.15 | −0.01 | 0.30 | 0.44 | 0.29 |
263114_at | AT1G03130 | photosystem I subunit D-2 | −0.18 | 0.01 | 0.18 | 0.38 | 0.20 |
263296_at | AT2G38800 | Plant calmodulin-binding protein-related | −0.18 | 0.04 | 0.26 | 0.49 | 0.31 |
263433_at | AT2G22240 | myo-inositol-1-phosphate synthase 2 | −0.35 | −0.08 | 0.21 | 0.47 | 0.13 |
264338_at | AT1G70300 | K+ uptake permease 6 | −0.22 | 0.03 | 0.47 | 0.73 | 0.50 |
264339_at | AT1G70290 | trehalose-6-phosphatase synthase S8 | −0.50 | 0.06 | 0.22 | 0.78 | 0.28 |
265111_at | AT1G62510 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −1.07 | −0.10 | 1.31 | 2.28 | 1.21 |
265481_at | AT2G15960 | unknown protein; Has 14 Blast hits to 14 proteins in 5 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−14; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.59 | −0.03 | 0.23 | 0.78 | 0.20 |
265760_at | AT2G01220 | Nucleotidylyl transferase superfamily protein | −0.08 | 0.01 | 0.31 | 0.40 | 0.32 |
266106_at | AT2G45170 | AUTOPHAGY 8E | −0.35 | −0.05 | 0.16 | 0.47 | 0.12 |
266363_at | AT2G41250 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | −0.63 | −0.26 | 0.09 | 0.46 | −0.17 |
266899_at | AT2G34620 | Mitochondrial transcription termination factor family protein | −0.26 | −0.08 | 0.26 | 0.44 | 0.18 |
266910_at | AT2G45920 | U-box domain-containing protein | −0.11 | −0.02 | 0.45 | 0.54 | 0.43 |
267262_at | AT2G22990 | sinapoylglucose 1 | −0.54 | −0.20 | 0.15 | 0.50 | −0.04 |
267265_at | AT2G22980 | serine carboxypeptidase-like 13 | −0.19 | 0.06 | 0.21 | 0.46 | 0.27 |
267389_at | AT2G44460 | beta glucosidase 28 | −0.90 | −0.63 | 0.89 | 1.16 | 0.25 |
267532_at | AT2G42040 | CONTAINS InterPro DOMAIN/s: WRC (InterPro: IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae−0; Bacteria−0; Metazoa−3; Fungi−0; Plants−215; Viruses−0; Other Eukaryotes−1 (source: NCBI BLink). | −0.06 | 0.11 | 0.22 | 0.39 | 0.33 |
267644_s_at | AT2G32880 | [AT2G32880, TRAF-like family protein]; [AT2G32870, TRAF-like family protein] | −0.36 | −0.13 | 0.31 | 0.54 | 0.18 |
ID | Locus | description | W+FR effect (22˚C) | W+FR effect (26˚C) | 26˚C effect (WL) | 26˚C effect (W+FR) | W+FR+ 26˚C effect |
---|---|---|---|---|---|---|---|
246228_at | AT4G36430 | Peroxidase superfamily protein | −0.05 | −0.80 | 0.11 | −0.64 | −0.69 |
247478_at | AT5G62360 | Plant invertase/pectin methylesterase inhibitor superfamily protein | −1.02 | −0.52 | −0.51 | −0.01 | −1.03 |
247793_at | AT5G58650 | plant peptide containing sulfated tyrosine 1 | −0.37 | −0.30 | −0.20 | −0.13 | −0.50 |
248050_at | AT5G56100 | glycine-rich protein/oleosin | −0.33 | −0.28 | −0.14 | −0.09 | −0.42 |
248197_at | AT5G54190 | protochlorophyllide oxidoreductase A | −0.28 | −0.19 | −0.20 | −0.12 | −0.39 |
248337_at | AT5G52310 | low-temperature-responsive protein 78 (LTI78)/desiccation-responsive protein 29A (RD29A) | −0.48 | −0.06 | −0.76 | −0.34 | −0.82 |
249741_at | AT5G24470 | pseudo-response regulator 5 | −0.23 | −0.03 | −0.45 | −0.25 | −0.48 |
249850_at | AT5G23240 | DNAJ heat shock N-terminal domain-containing protein | −0.39 | −0.59 | −0.18 | −0.38 | −0.77 |
251036_at | AT5G02160 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−121; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.63 | −0.16 | −0.31 | 0.15 | −0.47 |
251744_at | AT3G56010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−25; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.49 | −0.26 | −0.18 | 0.05 | −0.44 |
252374_at | AT3G48100 | response regulator 5 | −0.11 | −0.34 | −0.11 | −0.33 | −0.44 |
252562_s_at | AT3G46320 | [AT3G46320, Histone superfamily protein]; [AT3G45930, Histone superfamily protein] | −0.17 | 0.00 | −0.37 | −0.20 | −0.37 |
252629_at | AT3G44970 | Cytochrome P450 superfamily protein | −0.50 | −0.70 | −0.31 | −0.51 | −1.01 |
253004_at | AT4G38280 | [AT4G38280, BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin−III homolog (TAIR:AT2G45250.1); Has 65 Blast hits to 65 proteins in 13 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−2; Plants−63; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink).]; [AT4G38330, Integral membrane protein hemolysin−III homolog]; [AT2G45250, Integral membrane protein hemolysin−III homolog] | −0.58 | −0.47 | −0.10 | 0.01 | −0.58 |
253496_at | AT4G31870 | glutathione peroxidase 7 | −0.46 | −0.47 | −0.09 | −0.09 | −0.55 |
253627_at | AT4G30650 | Low temperature and salt responsive protein family | −0.46 | −0.43 | −0.64 | −0.60 | −1.07 |
254543_at | AT4G19810 | Glycosyl hydrolase family protein with chitinase insertion domain | −0.28 | −0.46 | −0.25 | −0.43 | −0.71 |
254889_at | AT4G11650 | osmotin 34 | 0.05 | −1.90 | 0.49 | −1.46 | −1.41 |
255331_at | AT4G04330 | Chaperonin-like RbcX protein | −0.42 | −0.34 | −0.43 | −0.34 | −0.77 |
256796_at | AT3G22210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 13 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−26; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.20 | −0.21 | −0.19 | −0.20 | −0.40 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
257939_at | AT3G19930 | sugar transporter 4 | −0.24 | −0.27 | −0.14 | −0.16 | −0.40 | ||||||
257985_at | AT3G20810 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | −0.22 | −0.47 | −0.12 | −0.37 | −0.59 | ||||||
258419_at | AT3G16670 | Pollen Ole e 1 allergen and extensin family protein | −0.42 | −0.01 | −0.83 | −0.41 | −0.83 | ||||||
259207_at | AT3G09050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae−4; Bacteria−10; Metazoa−33; Fungi−2; Plants−44; Viruses−0; Other Eukaryotes−27 (source: NCBI BLink). | −0.25 | −0.19 | −0.30 | −0.24 | −0.49 | ||||||
260064_at | AT1G73730 | ETHYLENE-INSENSITIVE3-like 3 | −0.11 | −0.25 | −0.11 | −0.24 | −0.36 | ||||||
261068_at | AT1G07450 | NAD(P)-binding Rossmann-fold superfamily protein | −0.37 | −0.44 | −0.15 | −0.22 | −0.59 | ||||||
261569_at | AT1G01060 | Homeodomain-like superfamily protein | −0.60 | −0.35 | −0.25 | 0.00 | −0.60 | ||||||
261638_at | AT1G49975 | INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−34; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.31 | −0.15 | −0.21 | −0.06 | −0.36 | ||||||
262119_s_at | AT1G02930 | [AT1G02930, glutathione S-transferase 6]; [AT1G02920, glutathione S-transferase 7] | −0.35 | −0.73 | 0.17 | −0.21 | −0.56 | ||||||
262899_at | AT1G59870 | ABC-2 and Plant PDR ABC-type transporter family protein | −0.36 | −0.19 | −0.42 | −0.24 | −0.60 | ||||||
263495_at | AT2G42530 | cold regulated 15b | −0.42 | −0.28 | −0.58 | −0.44 | −0.86 | ||||||
263922_s_at | AT2G36580 | [AT2G36580, Pyruvate kinase family protein]; [AT3G52990, Pyruvate kinase family protein] | −0.20 | −0.20 | −0.25 | −0.25 | −0.45 | ||||||
264511_at | AT1G09350 | galactinol synthase 3 | −0.73 | −0.02 | −0.58 | 0.13 | −0.60 | ||||||
265478_at | AT2G15890 | maternal effect embryo arrest 14 | −0.56 | −0.21 | −0.42 | −0.06 | −0.63 | ||||||
265962_at | AT2G37460 | nodulin MtN21 /EamA-like transporter family protein | −0.26 | −0.10 | −0.47 | −0.31 | −0.57 | ||||||
265999_at | AT2G24100 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−95; Viruses−0; Other Eukaryotes−6 (source: NCBI BLink). | −0.46 | −0.33 | −0.17 | −0.05 | −0.51 | ||||||
266746_s_at | AT2G02930 | [AT2G02930, glutathione S-transferase F3]; [AT4G02520, glutathione S-transferase PHI 2] | −0.52 | −0.34 | −0.65 | −0.48 | −0.99 | ||||||
267053_s_at | AT2G38380 | [AT2G38380, Peroxidase superfamily protein]; [AT2G38390, Peroxidase superfamily protein] | −0.14 | −1.09 | 0.01 | −0.94 | −1.08 | ||||||
267344_at | AT2G44230 | Plant protein of unknown function (DUF946) | −0.23 | −0.40 | −0.04 | −0.20 | −0.44 | ||||||
267461_at | AT2G33830 | Dormancy/auxin associated family protein | −1.38 | −0.79 | −0.85 | −0.25 | −1.64 | ||||||
ID | Locus | Description | Treatment Effects | FR effect ratio 26˚C/ 22˚C | |||
---|---|---|---|---|---|---|---|
<1> W+FR effect (22˚C) | <2> W+FR effect (26˚C) | <3> 26˚C effect (WL) | <4> 26˚C effect (W+FR) | ||||
254889_at | AT4G11650 | osmotin 34 | 0.05 | −1.90 | 0.49 | −1.46 | −1.95 |
262260_at | AT1G70850 | MLP-like protein 34 | 0.79 | −1.02 | 1.08 | −0.73 | −1.81 |
260130_s_at | AT1G66280 | [AT1G66280, Glycosyl hydrolase superfamily protein]; [AT1G66270, Glycosyl hydrolase superfamily protein] | 0.83 | −0.93 | 0.87 | −0.89 | −1.76 |
250500_at | AT5G09530 | hydroxyproline-rich glycoprotein family protein | 0.07 | −1.22 | 0.39 | −0.91 | −1.30 |
266353_at | AT2G01520 | MLP-like protein 328 | 0.09 | −1.18 | 1.23 | −0.05 | −1.28 |
256601_s_at | AT3G28290 | [AT3G28290, Protein of unknown function (DUF677)]; [AT3G28300, Protein of unknown function (DUF677)] | 0.45 | −0.72 | 0.87 | −0.30 | −1.17 |
262832_s_at | AT1G14870 | [AT1G14870, PLANT CADMIUM RESISTANCE 2]; [AT1G14880, PLANT CADMIUM RESISTANCE 1] | 0.29 | −0.87 | 0.85 | −0.31 | −1.17 |
254044_at | AT4G25820 | xyloglucan endotransglucosylase/hydrolase 14 | 0.60 | −0.51 | 0.51 | −0.60 | −1.11 |
260408_at | AT1G69880 | thioredoxin H-type 8 | 0.53 | −0.53 | 0.64 | −0.42 | −1.06 |
249375_at | AT5G40730 | arabinogalactan protein 24 | 0.29 | −0.76 | 0.55 | −0.50 | −1.05 |
246825_at | AT5G26260 | TRAF-like family protein | 0.44 | −0.61 | 0.79 | −0.25 | −1.05 |
257382_at | AT2G40750 | WRKY DNA-binding protein 54 | 0.44 | −0.56 | −0.23 | −1.23 | −1.00 |
265665_at | AT2G27420 | Cysteine proteinases superfamily protein | 1.20 | 0.22 | 0.22 | −0.76 | −0.98 |
266142_at | AT2G39030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | −0.63 | −1.59 | 3.01 | 2.05 | −0.96 |
267053_s_at | AT2G38380 | [AT2G38380, Peroxidase superfamily protein]; [AT2G38390, Peroxidase superfamily protein] | −0.14 | −1.09 | 0.01 | −0.94 | −0.95 |
265837_at | AT2G14560 | Protein of unknown function (DUF567) | 0.45 | −0.47 | −0.99 | −1.91 | −0.92 |
264577_at | AT1G05260 | Peroxidase superfamily protein | 0.53 | −0.34 | 0.19 | −0.67 | −0.87 |
265334_at | AT2G18370 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | 0.17 | −0.70 | 0.44 | −0.42 | −0.87 |
256603_at | AT3G28270 | Protein of unknown function (DUF677) | 0.58 | −0.28 | 1.05 | 0.18 | −0.86 |
262517_at | AT1G17180 | glutathione S-transferase TAU 25 | 0.34 | −0.51 | 0.33 | −0.52 | −0.85 |
257217_at | AT3G14940 | phosphoenolpyruvate carboxylase 3 | 0.52 | −0.34 | 0.25 | −0.60 | −0.85 |
246855_at | AT5G26280 | TRAF-like family protein | 0.37 | −0.47 | 0.48 | −0.36 | −0.85 |
258270_at | AT3G15650 | alpha/beta-Hydrolases superfamily protein | 0.66 | −0.17 | 0.02 | −0.82 | −0.84 |
262373_at | AT1G73120 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−36; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.66 | −0.18 | 0.32 | −0.51 | −0.84 |
256994_s_at | AT3G25830 | [AT3G25830, terpene synthase-like sequence-1,8-cineole]; [AT3G25820, terpene synthase-like sequence-1,8-cineole] | 0.17 | −0.66 | 0.65 | −0.18 | −0.83 |
247874_at | AT5G57710 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | 0.57 | −0.26 | 0.39 | −0.44 | −0.83 |
253073_at | AT4G37410 | cytochrome P450, family 81, subfamily F, polypeptide 4 | 0.39 | −0.42 | 0.88 | 0.07 | −0.81 |
245275_at | AT4G15210 | beta-amylase 5 | 0.15 | −0.66 | 1.93 | 1.12 | −0.81 |
264400_at | AT1G61800 | glucose-6-phosphate/phosphate translocator 2 | 1.10 | 0.30 | 0.35 | −0.45 | −0.80 |
---|---|---|---|---|---|---|---|
263161_at | AT1G54020 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.30 | −0.50 | 1.73 | 0.93 | −0.80 |
266229_at | AT2G28840 | XB3 ortholog 1 in Arabidopsis thaliana | 0.69 | −0.09 | 0.37 | −0.41 | −0.78 |
256245_at | AT3G12580 | heat shock protein 70 | 0.43 | −0.34 | 2.35 | 1.58 | −0.77 |
256243_at | AT3G12500 | basic chitinase | 0.18 | −0.59 | 0.37 | −0.41 | −0.77 |
262128_at | AT1G52690 | Late embryogenesis abundant protein (LEA) family protein | 0.93 | 0.16 | 0.29 | −0.47 | −0.77 |
266578_at | AT2G23910 | NAD(P)-binding Rossmann-fold superfamily protein | 0.25 | −0.52 | −0.17 | −0.93 | −0.77 |
249599_at | AT5G37990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.39 | −0.36 | 1.19 | 0.44 | −0.76 |
264613_at | AT1G04640 | lipoyltransferase 2 | 0.75 | 0.00 | 0.42 | −0.33 | −0.75 |
246228_at | AT4G36430 | Peroxidase superfamily protein | −0.05 | −0.80 | 0.11 | −0.64 | −0.75 |
265058_s_at | AT1G52040 | [AT1G52040, myrosinase-binding protein 1]; [AT1G52030, myrosinase-binding protein 2] | 0.39 | −0.35 | 0.81 | 0.07 | −0.75 |
247718_at | AT5G59310 | lipid transfer protein 4 | 0.72 | −0.02 | 0.82 | 0.08 | −0.74 |
264006_at | AT2G22430 | homeobox protein 6 | 0.85 | 0.11 | 0.63 | −0.11 | −0.74 |
256933_at | AT3G22600 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | 0.08 | −0.66 | 0.44 | −0.30 | −0.73 |
245265_at | AT4G14400 | ankyrin repeat family protein | 0.26 | −0.47 | −0.22 | −0.96 | −0.73 |
262133_at | AT1G78000 | sulfate transporter 1;2 | 0.04 | −0.68 | 0.76 | 0.03 | −0.72 |
252102_at | AT3G50970 | dehydrin family protein | 0.14 | −0.58 | −0.55 | −1.27 | −0.72 |
256766_at | AT3G22231 | pathogen and circadian controlled 1 | 0.38 | −0.33 | −0.36 | −1.07 | −0.71 |
245422_at | AT4G17470 | alpha/beta-Hydrolases superfamily protein | 0.38 | −0.33 | 1.51 | 0.80 | −0.71 |
250558_at | AT5G07990 | Cytochrome P450 superfamily protein | −0.05 | −0.75 | 0.36 | −0.34 | −0.70 |
256787_at | AT3G13790 | Glycosyl hydrolases family 32 protein | 0.06 | −0.63 | 0.61 | −0.09 | −0.70 |
249953_at | AT5G18960 | FAR1-related sequence 12 | 0.62 | −0.07 | 0.22 | −0.47 | −0.69 |
255516_at | AT4G02270 | root hair specific 13 | 0.20 | −0.49 | 0.30 | −0.39 | −0.69 |
266330_at | AT2G01530 | MLP-like protein 329 | 0.19 | −0.50 | 0.61 | −0.07 | −0.69 |
267545_at | AT2G32690 | glycine-rich protein 23 | 0.66 | −0.02 | 0.44 | −0.24 | −0.68 |
250090_at | AT5G17330 | glutamate decarboxylase | 0.29 | −0.39 | 0.54 | −0.14 | −0.68 |
251531_at | AT3G58550 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | 0.08 | −0.59 | 0.33 | −0.35 | −0.68 |
266941_at | AT2G18980 | Peroxidase superfamily protein | 0.08 | −0.59 | 0.52 | −0.16 | −0.67 |
249986_at | AT5G18460 | Protein of Unknown Function (DUF239) | 0.58 | −0.10 | 0.11 | −0.56 | −0.67 |
249383_at | AT5G39860 | basic helix-loop-helix (bHLH) DNA-binding family protein | 1.04 | 0.37 | 0.90 | 0.23 | −0.67 |
247717_at | AT5G59320 | lipid transfer protein 3 | 0.75 | 0.09 | 1.21 | 0.55 | −0.66 |
256924_at | AT3G29590 | HXXXD-type acyl-transferase family protein | 0.22 | −0.44 | 0.29 | −0.37 | −0.66 |
265118_at | AT1G62660 | Glycosyl hydrolases family 32 protein | 0.43 | −0.23 | 0.74 | 0.08 | −0.66 |
251705_at | AT3G56400 | WRKY DNA-binding protein 70 | 0.13 | −0.53 | −0.15 | −0.80 | −0.66 |
248185_at | AT5G54060 | UDP-glucose: flavonoid 3-o-glucosyltransferase | −0.01 | −0.66 | 0.45 | −0.21 | −0.66 |
259561_at | AT1G21250 | cell wall-associated kinase | 0.31 | −0.34 | −0.22 | −0.87 | −0.65 |
---|---|---|---|---|---|---|---|
256577_at | AT3G28220 | TRAF-like family protein | 0.32 | −0.33 | 0.42 | −0.23 | −0.65 |
250942_at | AT5G03350 | Legume lectin family protein | −0.24 | −0.88 | −0.79 | −1.43 | −0.65 |
249215_at | AT5G42800 | dihydroflavonol 4-reductase | −0.07 | −0.72 | 0.33 | −0.31 | −0.65 |
263133_at | AT1G78450 | SOUL heme-binding family protein | 0.72 | 0.07 | −0.21 | −0.86 | −0.64 |
253582_at | AT4G30670 | Putative membrane lipoprotein | 0.30 | −0.33 | 0.45 | −0.18 | −0.63 |
248268_at | AT5G53480 | ARM repeat superfamily protein | 0.71 | 0.09 | 0.10 | −0.52 | −0.62 |
250083_at | AT5G17220 | glutathione S-transferase phi 12 | 0.24 | −0.37 | 0.22 | −0.39 | −0.61 |
259040_at | AT3G09270 | glutathione S-transferase TAU 8 | 0.16 | −0.45 | 0.52 | −0.10 | −0.61 |
247814_at | AT5G58310 | methyl esterase 18 | 0.66 | 0.05 | −0.36 | −0.97 | −0.61 |
267595_at | AT2G32990 | glycosyl hydrolase 9B8 | 0.80 | 0.19 | 0.07 | −0.54 | −0.61 |
267076_at | AT2G41090 | Calcium-binding EF-hand family protein | 0.28 | −0.32 | −0.15 | −0.76 | −0.60 |
245816_at | AT1G26210 | SOB five-like 1 | 0.57 | −0.03 | 0.14 | −0.46 | −0.60 |
256937_at | AT3G22620 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.06 | −0.66 | 0.30 | −0.29 | −0.59 |
253608_at | AT4G30290 | xyloglucan endotransglucosylase/hydrolase 19 | 0.08 | −0.51 | 0.30 | −0.29 | −0.59 |
255604_at | AT4G01080 | TRICHOME BIREFRINGENCE-LIKE 26 | 0.37 | −0.22 | 0.34 | −0.24 | −0.59 |
254234_at | AT4G23680 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 0.53 | −0.06 | 1.17 | 0.58 | −0.58 |
254833_s_at | AT4G12280 | [AT4G12280, copper amine oxidase family protein]; [AT4G12290, Copper amine oxidase family protein] | 0.42 | −0.16 | 0.33 | −0.25 | −0.58 |
251292_at | AT3G61920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−77; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.42 | −0.16 | 0.24 | −0.34 | −0.58 |
253697_at | AT4G29700 | Alkaline-phosphatase-like family protein | 0.47 | −0.11 | 0.72 | 0.15 | −0.58 |
252607_at | AT3G44990 | xyloglucan endo-transglycosylase-related 8 | 0.56 | −0.02 | −0.38 | −0.95 | −0.57 |
245624_at | AT4G14090 | UDP-Glycosyltransferase superfamily protein | 0.19 | −0.37 | 0.23 | −0.34 | −0.57 |
253510_at | AT4G31730 | glutamine dumper 1 | 0.30 | −0.27 | 0.14 | −0.43 | −0.57 |
258546_at | AT3G07060 | NHL domain-containing protein | 0.55 | −0.01 | 0.09 | −0.47 | −0.56 |
259327_at | AT3G16460 | Mannose-binding lectin superfamily protein | 0.31 | −0.26 | 0.55 | −0.01 | −0.56 |
245317_at | AT4G15610 | Uncharacterised protein family (UPF0497) | −0.09 | −0.65 | 0.58 | 0.02 | −0.56 |
254737_at | AT4G13840 | HXXXD-type acyl-transferase family protein | 0.58 | 0.02 | 0.09 | −0.47 | −0.56 |
259878_at | AT1G76790 | O-methyltransferase family protein | 0.27 | −0.29 | 0.31 | −0.25 | −0.56 |
260332_at | AT1G70470 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae−0; Bacteria−2; Metazoa−7; Fungi−10; Plants−43; Viruses−0; Other Eukaryotes−2 (source: NCBI BLink). | 0.51 | −0.05 | 0.34 | −0.22 | −0.56 |
264287_at | AT1G61930 | Protein of unknown function, DUF584 | 0.48 | −0.08 | 0.24 | −0.32 | −0.56 |
---|---|---|---|---|---|---|---|
261033_at | AT1G17380 | jasmonate-zim-domain protein 5 | 0.28 | −0.28 | 0.91 | 0.35 | −0.56 |
248867_at | AT5G46830 | NACL-inducible gene 1 | 0.24 | −0.31 | 0.71 | 0.15 | −0.56 |
252387_at | AT3G47800 | Galactose mutarotase-like superfamily protein | 0.25 | −0.30 | −0.02 | −0.58 | −0.56 |
254283_s_at | AT4G22870 | [AT4G22870, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein]; [AT4G22880, leucoanthocyanidin dioxygenase] | 0.03 | −0.52 | 0.31 | −0.25 | −0.55 |
256781_at | AT3G13650 | Disease resistance-responsive (dirigent-like protein) family protein | 0.71 | 0.16 | 0.13 | −0.42 | −0.55 |
249790_at | AT5G24290 | Vacuolar iron transporter (VIT) family protein | 0.25 | −0.30 | 0.26 | −0.28 | −0.55 |
250483_at | AT5G10300 | methyl esterase 5 | 0.16 | −0.39 | 0.67 | 0.12 | −0.55 |
264998_at | AT1G67330 | Protein of unknown function (DUF579) | 0.20 | −0.34 | 0.22 | −0.32 | −0.54 |
246273_at | AT4G36700 | RmlC-like cupins superfamily protein | −0.24 | −0.78 | 0.16 | −0.38 | −0.54 |
265393_at | AT2G20830 | transferases;folic acid binding | 0.39 | −0.15 | −0.05 | −0.59 | −0.54 |
249567_at | AT5G38020 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.39 | −0.14 | 0.34 | −0.20 | −0.54 |
255595_at | AT4G01700 | Chitinase family protein | 0.39 | −0.14 | 0.09 | −0.44 | −0.53 |
245628_at | AT1G56650 | production of anthocyanin pigment 1 | −0.06 | −0.58 | 0.58 | 0.05 | −0.53 |
256981_at | AT3G13380 | BRI1-like 3 | 0.36 | −0.17 | 0.02 | −0.50 | −0.52 |
259548_at | AT1G35260 | MLP-like protein 165 | 0.56 | 0.04 | 0.08 | −0.45 | −0.52 |
265091_s_at | AT1G03940 | [AT1G03940, HXXXD-type acyl-transferase family protein];[AT1G03495, HXXXD-type acyl-transferase family protein] | −0.11 | −0.63 | 0.38 | −0.15 | −0.52 |
250927_at | AT5G03270 | lysine decarboxylase family protein | 0.19 | −0.33 | 0.34 | −0.18 | −0.52 |
256418_at | AT3G06160 | AP2/B3-like transcriptional factor family protein | 0.58 | 0.06 | 0.16 | −0.36 | −0.52 |
248315_at | AT5G52630 | mitochondrial RNAediting factor 1 | 0.37 | −0.15 | 0.28 | −0.24 | −0.52 |
260522_x_at | AT2G41730 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−25; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.02 | −0.50 | −0.34 | −0.85 | −0.52 |
260943_at | AT1G45145 | thioredoxin H-type 5 | 0.27 | −0.25 | 0.27 | −0.25 | −0.52 |
258293_at | AT3G23430 | phosphate 1 | 0.24 | −0.27 | 0.09 | −0.43 | −0.52 |
264223_s_at | AT3G16030 | lectin protein kinase family protein | 0.25 | −0.26 | 0.18 | −0.34 | −0.51 |
257952_at | AT3G21770 | Peroxidase superfamily protein | 0.16 | −0.35 | 0.10 | −0.41 | −0.51 |
260146_at | AT1G52770 | Phototropic-responsive NPH3 family protein | 0.21 | −0.30 | −0.12 | −0.63 | −0.51 |
256617_at | AT3G22240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−177; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.31 | −0.20 | −0.22 | −0.73 | −0.51 |
257798_at | AT3G15950 | DNA topoisomerase-related | 0.42 | −0.09 | 0.53 | 0.02 | −0.51 |
256017_at | AT1G19180 | Jasmonate-zim-domain protein 1 | −0.01 | −0.52 | 0.62 | 0.11 | −0.51 |
266209_at | AT2G27550 | centroradialis | 0.58 | 0.08 | 0.13 | −0.38 | −0.50 |
265067_at | AT1G03850 | Glutaredoxin family protein | 0.07 | −0.44 | 0.37 | −0.13 | −0.50 |
257763_s_at | AT3G23120 | [AT3G23120, receptor like protein 38]; [AT3G23110, receptor like protein 37] | 0.46 | −0.05 | −0.08 | −0.59 | −0.50 |
ID | Locus | Description | Treatment Effects | FR effect ratio 26˚C/22˚C | |||
---|---|---|---|---|---|---|---|
<1> W+FR effect (22˚C) | <2> W+FR effect (26˚C) | <3> 26˚C effect (WL) | <4> 26˚C effect (W+FR) | ||||
259169_at | AT3G03520 | non-specific phospholipase C3 | 0.35 | −0.15 | 0.20 | −0.30 | −0.50 |
262661_s_at | AT1G14230 | [AT1G14230, GDA1/CD39 nucleoside phosphatase family protein];[AT1G14250, GDA1/CD39 nucleoside phosphatase family protein] | −0.33 | −0.83 | 0.69 | 0.19 | −0.50 |
258184_at | AT3G21510 | histidine-containing phosphotransmitter 1 | 0.28 | −0.22 | 0.19 | −0.30 | −0.50 |
258751_at | AT3G05890 | Low temperature and salt responsive protein family | 0.04 | −0.46 | 0.29 | −0.20 | −0.50 |
246390_at | AT1G77330 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.32 | −0.18 | 0.22 | −0.28 | −0.50 |
266884_at | AT2G44790 | uclacyanin 2 | 0.02 | −0.47 | 0.21 | −0.28 | −0.49 |
245904_at | AT5G11110 | sucrose phosphate synthase 2F | 0.61 | 0.12 | 0.29 | −0.20 | −0.49 |
261806_at | AT1G30510 | root FNR 2 | 0.33 | −0.15 | 0.06 | −0.43 | −0.49 |
245054_at | AT2G26460 | RED family protein | 0.57 | 0.09 | 0.21 | −0.27 | −0.48 |
253046_at | AT4G37370 | cytochrome P450, family 81, subfamily D, polypeptide 8 | −0.08 | −0.56 | 0.45 | −0.03 | −0.48 |
257644_at | AT3G25780 | allene oxide cyclase 3 | 0.22 | −0.26 | 0.60 | 0.12 | −0.48 |
251254_at | AT3G62270 | HCO3-transporter family | 0.26 | −0.22 | 0.04 | −0.44 | −0.48 |
262317_at | AT2G48140 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.14 | −0.62 | 0.23 | −0.25 | −0.48 |
267425_at | AT2G34810 | FAD-binding Berberine family protein | −0.02 | −0.50 | 1.23 | 0.75 | −0.48 |
257765_at | AT3G23020 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.21 | −0.26 | 0.35 | −0.13 | −0.48 |
266368_at | AT2G41380 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.35 | −0.13 | 0.84 | 0.37 | −0.48 |
254341_at | AT4G22130 | STRUBBELIG-receptor family 8 | 0.50 | 0.03 | 0.05 | −0.42 | −0.48 |
263098_at | AT2G16005 | MD-2-related lipid recognition domain-containing protein | −0.01 | −0.49 | 0.32 | −0.15 | −0.47 |
256090_at | no_match | no_match | 0.23 | −0.24 | 0.42 | −0.05 | −0.47 |
262518_at | AT1G17170 | glutathione S-transferase TAU 24 | 0.33 | −0.14 | −0.49 | −0.96 | −0.47 |
265389_at | AT2G20690 | lumazine-binding family protein | 0.36 | −0.11 | 0.08 | −0.39 | −0.47 |
259609_at | AT1G52410 | TSK-associating protein 1 | 0.37 | −0.10 | 0.62 | 0.15 | −0.47 |
247704_at | AT5G59510 | ROTUNDIFOLIA like 5 | 0.33 | −0.14 | 0.42 | −0.04 | −0.47 |
258983_at | AT3G08860 | PYRIMIDINE 4 | 0.11 | −0.36 | 0.91 | 0.45 | −0.47 |
262615_at | AT1G13950 | eukaryotic elongation factor 5A-1 | 0.51 | 0.05 | 0.67 | 0.21 | −0.46 |
262608_at | AT1G14120 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.25 | −0.21 | 1.20 | 0.74 | −0.46 |
263369_at | AT2G20480 | unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−19; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.43 | −0.02 | 0.19 | −0.27 | −0.46 |
248169_at | AT5G54610 | ankyrin | 0.20 | −0.25 | −0.18 | −0.63 | −0.46 |
257375_at | AT2G38640 | Protein of unknown function (DUF567) | −0.01 | −0.46 | 0.18 | −0.27 | −0.45 |
259835_at | AT1G52160 | tRNAse Z3 | 0.28 | −0.17 | 0.05 | −0.40 | −0.45 |
248434_at | AT5G51440 | HSP20-like chaperones superfamily protein | −0.07 | −0.53 | 1.02 | 0.57 | −0.45 |
---|---|---|---|---|---|---|---|
252549_at | AT3G45860 | cysteine-rich RLK (RECEPTOR-like protein kinase) 4 | 0.70 | 0.25 | 0.43 | −0.02 | −0.45 |
258537_at | AT3G04210 | Disease resistance protein (TIR-NBS class) | 0.01 | −0.44 | −0.23 | −0.68 | −0.45 |
266503_at | AT2G47780 | Rubber elongation factor protein (REF) | 0.07 | −0.38 | 0.59 | 0.14 | −0.45 |
252698_at | AT3G43670 | Copper amine oxidase family protein | 0.31 | −0.14 | 0.16 | −0.29 | −0.45 |
253456_at | AT4G32050 | neurochondrin family protein | 0.30 | −0.15 | 0.33 | −0.12 | −0.45 |
264005_at | AT2G22470 | arabinogalactan protein 2 | 0.46 | 0.01 | 0.41 | −0.04 | −0.45 |
261221_at | AT1G19960 | BEST Arabidopsis thaliana protein match is: transmembrane receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41 proteins in 17 species: Archae−0; Bacteria−2; Metazoa−23; Fungi−0; Plants−11; Viruses−0; Other Eukaryotes−5 (source: NCBI BLink). | 0.31 | −0.14 | −0.03 | −0.48 | −0.45 |
253532_at | AT4G31570 | CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro: IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae−3688; Bacteria−38556; Metazoa−84828; Fungi−17265; Plants−10589; Viruses−805; Other Eukaryotes−38623 (source: NCBI BLink). | 0.49 | 0.04 | 0.25 | −0.20 | −0.45 |
249754_at | AT5G24530 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.06 | −0.39 | 0.12 | −0.33 | −0.45 |
259694_at | AT1G63180 | UDP-D-glucose/UDP-D-galactose 4-epimerase 3 | 0.40 | −0.05 | 0.32 | −0.13 | −0.45 |
245216_at | AT4G16143 | importin alpha isoform 2 | 0.32 | −0.12 | 0.03 | −0.42 | −0.45 |
250292_at | AT5G13220 | jasmonate-zim-domain protein 10 | 0.23 | −0.22 | 0.47 | 0.03 | −0.45 |
252234_at | AT3G49780 | phytosulfokine 4 precursor | 0.20 | −0.25 | 0.22 | −0.22 | −0.45 |
259677_at | AT1G77740 | phosphatidylinositol-4-phosphate 5-kinase 2 | 0.17 | −0.28 | 0.09 | −0.35 | −0.44 |
263829_at | AT2G40435 | BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−289; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.22 | −0.22 | 0.34 | −0.11 | −0.44 |
256321_at | AT1G55020 | lipoxygenase 1 | −0.06 | −0.50 | 0.50 | 0.06 | −0.44 |
261713_at | AT1G32640 | Basic helix-loop-helix (bHLH) DNA-binding family protein | 0.26 | −0.19 | 0.72 | 0.28 | −0.44 |
248118_at | AT5G55050 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.22 | −0.22 | 0.31 | −0.13 | −0.44 |
253145_at | AT4G35560 | Transducin/WD40 repeat-like superfamily protein | 0.47 | 0.03 | 0.15 | −0.29 | −0.44 |
250438_at | AT5G10580 | Protein of unknown function, DUF599 | 0.02 | −0.42 | 0.15 | −0.29 | −0.44 |
251634_at | AT3G57480 | zinc finger (C2H2 type, AN1-like) family protein | 0.28 | −0.16 | 0.30 | −0.14 | −0.44 |
247684_at | AT5G59670 | Leucine-rich repeat protein kinase family protein | 0.49 | 0.05 | −0.32 | −0.76 | −0.44 |
251304_at | AT3G61990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.53 | 0.09 | 0.03 | −0.41 | −0.44 |
249289_at | AT5G41040 | HXXXD-type acyl-transferase family protein | 0.00 | −0.43 | 0.19 | −0.24 | −0.44 |
248559_at | AT5G50012 | [AT5G50012, conserved peptide upstream open reading frame 36];[AT5G50011, conserved peptide upstream open reading frame 37];[AT5G50010, sequence-specific DNA binding transcription factors;transcription regulators] | 0.24 | −0.20 | 0.16 | −0.27 | −0.44 |
264142_at | AT1G78930 | Mitochondrial transcription termination factor family protein | 0.21 | −0.22 | 0.22 | −0.22 | −0.44 |
250194_at | AT5G14550 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 0.37 | −0.07 | 0.15 | −0.29 | −0.43 |
---|---|---|---|---|---|---|---|
261402_at | AT1G79670 | Wall-associated kinase family protein | 0.13 | −0.30 | 0.35 | −0.08 | −0.43 |
250968_at | AT5G02890 | HXXXD-type acyl-transferase family protein | 0.49 | 0.06 | 0.17 | −0.26 | −0.43 |
258125_s_at | AT3G23530 | [AT3G23530, Cyclopropane-fatty-acyl-phospholipid synthase];[AT3G23510, Cyclopropane-fatty-acyl-phospholipid synthase] | 0.70 | 0.27 | −0.03 | −0.46 | −0.43 |
264342_at | AT1G12080 | Vacuolar calcium-binding protein-related | 0.83 | 0.39 | 0.10 | −0.33 | −0.43 |
261339_at | AT1G35710 | Protein kinase family protein with leucine-rich repeat domain | 0.29 | −0.14 | −0.36 | −0.80 | −0.43 |
261431_at | AT1G18710 | myb domain protein 47 | 0.41 | −0.03 | 0.17 | −0.26 | −0.43 |
264782_at | AT1G08810 | myb domain protein 60 | 0.25 | −0.18 | 0.13 | −0.30 | −0.43 |
260693_at | AT1G32450 | nitrate transporter 1.5 | −0.06 | −0.49 | 0.14 | −0.29 | −0.43 |
257517_at | AT3G16330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−109; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.51 | 0.09 | 0.28 | −0.15 | −0.43 |
264960_at | AT1G76930 | extensin 4 | −0.20 | −0.63 | 0.03 | −0.40 | −0.43 |
261494_at | AT1G28420 | homeobox-1 | 0.56 | 0.14 | 0.08 | −0.35 | −0.42 |
252108_at | AT3G51530 | F-box/RNI-like/FBD-like domains-containing protein | 0.23 | −0.20 | 0.34 | −0.08 | −0.42 |
266316_at | AT2G27080 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | 0.00 | −0.42 | 0.38 | −0.04 | −0.42 |
254432_at | AT4G20830 | FAD-binding Berberine family protein | 0.05 | −0.37 | 0.29 | −0.13 | −0.42 |
249979_s_at | AT5G18860 | [AT5G18860, inosine-uridine preferring nucleoside hydrolase family protein];[AT5G18890, Inosine-uridine preferring nucleoside hydrolase family protein] | 0.23 | −0.19 | 0.07 | −0.35 | −0.42 |
252073_at | AT3G51750 | unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−15; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.37 | −0.05 | 0.06 | −0.36 | −0.42 |
247808_at | AT5G58190 | evolutionarily conserved C-terminal region 10 | 0.51 | 0.09 | 0.14 | −0.28 | −0.42 |
245055_at | AT2G26470 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae−41; Bacteria−1922; Metazoa−142; Fungi−125; Plants−44; Viruses−14; Other Eukaryotes−1358 (source: NCBI BLink). | 0.21 | −0.21 | 0.10 | −0.32 | −0.42 |
248332_at | AT5G52640 | heat shock protein 90.1 | 0.17 | −0.24 | 1.77 | 1.36 | −0.42 |
251400_at | AT3G60420 | Phosphoglycerate mutase family protein | 0.25 | −0.17 | −0.35 | −0.76 | −0.42 |
262644_at | AT1G62710 | beta vacuolar processing enzyme | 0.50 | 0.09 | 0.03 | −0.39 | −0.41 |
253246_at | AT4G34600 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−17; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.03 | −0.38 | 0.26 | −0.15 | −0.41 |
245252_at | AT4G17500 | ethylene responsive element binding factor 1 | 0.02 | −0.39 | 0.46 | 0.04 | −0.41 |
---|---|---|---|---|---|---|---|
262801_at | AT1G21010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−206; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.16 | −0.25 | 0.22 | −0.19 | −0.41 |
252123_at | AT3G51240 | flavanone 3-hydroxylase | 0.05 | −0.37 | 0.00 | −0.41 | −0.41 |
248145_at | AT5G54880 | DTW domain-containing protein | 0.22 | −0.19 | 0.11 | −0.30 | −0.41 |
254371_at | AT4G21760 | beta-glucosidase 47 | 0.06 | −0.35 | −0.06 | −0.47 | −0.41 |
261768_at | AT1G15550 | gibberellin 3-oxidase 1 | 0.03 | −0.38 | 0.11 | −0.29 | −0.41 |
264580_at | AT1G05340 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−21; Plants−168; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.35 | −0.06 | 0.39 | −0.02 | −0.41 |
249600_s_at | AT5G37940 | [AT5G37940, Zinc-binding dehydrogenase family protein]; [AT5G38000, Zinc-binding dehydrogenase family protein] | 0.42 | 0.01 | 0.22 | −0.19 | −0.41 |
258079_at | AT3G25940 | TFIIB zinc-binding protein | 0.33 | −0.08 | 0.14 | −0.27 | −0.41 |
252677_at | AT3G44320 | nitrilase 3 | 0.21 | −0.20 | 0.64 | 0.23 | −0.41 |
266352_at | AT2G01610 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 0.30 | −0.10 | 0.10 | −0.30 | −0.40 |
260549_at | AT2G43535 | Scorpion toxin-like knottin superfamily protein | 0.09 | −0.32 | 0.30 | −0.10 | −0.40 |
259009_at | AT3G09260 | Glycosyl hydrolase superfamily protein | 0.28 | −0.12 | 0.47 | 0.07 | −0.40 |
245253_at | AT4G15440 | hydroperoxide lyase 1 | 0.33 | −0.08 | 0.46 | 0.06 | −0.40 |
262131_at | AT1G02900 | rapid alkalinization factor 1 | −0.05 | −0.45 | 0.16 | −0.24 | −0.40 |
249361_at | AT5G40540 | Protein kinase superfamily protein | 0.31 | −0.09 | 0.10 | −0.30 | −0.40 |
261917_at | AT1G65920 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | 0.79 | 0.39 | 0.25 | −0.15 | −0.40 |
254783_at | AT4G12830 | alpha/beta-Hydrolases superfamily protein | 0.16 | −0.24 | −0.08 | −0.48 | −0.40 |
263544_at | AT2G21590 | Glucose-1-phosphate adenylyltransferase family protein | 0.49 | 0.10 | 0.12 | −0.28 | −0.40 |
265214_at | AT1G05000 | Phosphotyrosine protein phosphatases superfamily protein | 0.22 | −0.17 | −0.07 | −0.47 | −0.40 |
249545_at | AT5G38030 | MATE efflux family protein | 0.12 | −0.28 | 0.24 | −0.16 | −0.40 |
248353_at | AT5G52320 | cytochrome P450, family 96, subfamily A, polypeptide 4 | 0.41 | 0.01 | 0.12 | −0.28 | −0.40 |
267307_at | AT2G30210 | laccase 3 | 0.24 | −0.16 | 0.00 | −0.40 | −0.40 |
261428_at | AT1G18870 | isochorismate synthase 2 | 0.13 | −0.27 | 0.34 | −0.05 | −0.40 |
250045_at | AT5G17700 | MATE efflux family protein | 0.09 | −0.30 | 0.34 | −0.05 | −0.39 |
246464_at | AT5G16980 | Zinc-binding dehydrogenase family protein | 0.26 | −0.13 | −0.24 | −0.63 | −0.39 |
254909_at | AT4G11210 | Disease resistance-responsive (dirigent-like protein) family protein | 0.50 | 0.11 | 0.30 | −0.09 | −0.39 |
265122_at | AT1G62540 | flavin-monooxygenase glucosinolate S-oxygenase 2 | 0.49 | 0.09 | 0.74 | 0.35 | −0.39 |
---|---|---|---|---|---|---|---|
257876_at | AT3G17130 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 0.53 | 0.13 | 0.31 | −0.08 | −0.39 |
253396_at | AT4G32720 | La protein 1 | 0.43 | 0.04 | −0.08 | −0.47 | −0.39 |
252511_at | AT3G46280 | protein kinase-related | 0.18 | −0.21 | 0.67 | 0.28 | −0.39 |
260551_at | AT2G43510 | trypsin inhibitor protein 1 | −0.11 | −0.50 | 0.83 | 0.44 | −0.39 |
256875_at | AT3G26330 | cytochrome P450, family 71, subfamily B, polypeptide 37 | 0.31 | −0.09 | 0.32 | −0.07 | −0.39 |
262553_at | AT1G31360 | RECQ helicase L2 | 0.35 | −0.04 | 0.15 | −0.24 | −0.39 |
252114_at | AT3G51450 | Calcium-dependent phosphotriesterase superfamily protein | 0.21 | −0.18 | 0.75 | 0.36 | −0.39 |
256352_at | AT1G54970 | proline-rich protein 1 | 0.30 | −0.09 | 0.14 | −0.25 | −0.39 |
252131_at | AT3G50930 | cytochrome BC1 synthesis | 0.14 | −0.25 | 0.25 | −0.14 | −0.39 |
255535_at | AT4G01790 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.36 | −0.03 | 0.17 | −0.22 | −0.39 |
260416_at | AT1G69670 | cullin 3B | 0.22 | −0.17 | 0.16 | −0.23 | −0.39 |
259672_at | AT1G68990 | male gametophyte defective 3 | 0.29 | −0.10 | 0.24 | −0.15 | −0.39 |
266078_at | AT2G40670 | response regulator 16 | 0.60 | 0.22 | −0.33 | −0.72 | −0.39 |
259982_at | AT1G76410 | RING/U-box superfamily protein | 0.35 | −0.03 | 0.11 | −0.27 | −0.39 |
264859_at | AT1G24280 | glucose-6-phosphate dehydrogenase 3 | 0.28 | −0.10 | 0.05 | −0.34 | −0.39 |
244903_at | ATMG00660 | hypothetical protein | 0.62 | 0.23 | 0.49 | 0.11 | −0.39 |
250960_at | AT5G02940 | Protein of unknown function (DUF1012) | 0.18 | −0.21 | 0.37 | −0.01 | −0.38 |
258257_at | AT3G26770 | NAD(P)-binding Rossmann-fold superfamily protein | 0.16 | −0.23 | 0.23 | −0.16 | −0.38 |
254042_at | AT4G25810 | xyloglucan endotransglycosylase 6 | 0.00 | −0.38 | 0.73 | 0.34 | −0.38 |
257673_at | AT3G20370 | TRAF-like family protein | 0.05 | −0.33 | 0.35 | −0.04 | −0.38 |
258447_at | AT3G22450 | Ribosomal L18p/L5e family protein | 0.11 | −0.27 | −0.05 | −0.43 | −0.38 |
266081_at | AT2G37840 | Protein kinase superfamily protein | 0.30 | −0.08 | 0.13 | −0.25 | −0.38 |
251111_at | AT5G01310 | APRATAXIN-like | 0.36 | −0.02 | 0.21 | −0.17 | −0.38 |
252014_at | AT3G52870 | IQ calmodulin-binding motif family protein | 0.36 | −0.02 | 0.29 | −0.09 | −0.38 |
251980_at | AT3G53270 | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein | 0.19 | −0.19 | 0.30 | −0.08 | −0.38 |
263478_at | AT2G31880 | Leucine-rich repeat protein kinase family protein | 0.21 | −0.17 | 0.03 | −0.35 | −0.38 |
253917_at | AT4G27380 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.38 | 0.00 | 0.00 | −0.38 | −0.38 |
247198_at | AT5G65290 | LMBR1-like membrane protein | 0.32 | −0.06 | 0.31 | −0.06 | −0.38 |
246255_at | AT4G36650 | plant-specific TFIIB-related protein | 0.25 | −0.12 | 0.11 | −0.27 | −0.38 |
252367_at | AT3G48360 | BTB and TAZ domain protein 2 | −0.14 | −0.52 | −0.43 | −0.81 | −0.38 |
261958_at | AT1G64500 | Glutaredoxin family protein | 0.32 | −0.06 | 0.31 | −0.07 | −0.38 |
262811_at | AT1G11700 | Protein of unknown function, DUF584 | 0.54 | 0.16 | 0.25 | −0.13 | −0.38 |
262831_at | AT1G14730 | Cytochrome b561/ferric reductase transmembrane protein family | 0.32 | −0.05 | 0.11 | −0.27 | −0.38 |
251668_at | AT3G57010 | Calcium-dependent phosphotriesterase superfamily protein | 0.36 | −0.01 | 0.15 | −0.23 | −0.38 |
---|---|---|---|---|---|---|---|
259899_at | AT1G71210 | Pentatricopeptide repeat (PPR) superfamily protein | 0.29 | −0.08 | 0.04 | −0.33 | −0.38 |
251556_at | AT3G58840 | Tropomyosin-related | 0.24 | −0.14 | 0.34 | −0.04 | −0.38 |
250879_at | AT5G04060 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 0.26 | −0.12 | 0.33 | −0.05 | −0.38 |
252478_at | AT3G46540 | ENTH/VHS family protein | 0.24 | −0.13 | 0.22 | −0.16 | −0.38 |
262119_s_at | AT1G02930 | [AT1G02930, glutathione S-transferase 6]; [AT1G02920, glutathione S-transferase 7] | −0.35 | −0.73 | 0.17 | −0.21 | −0.38 |
259394_at | AT1G06420 | unknown protein; Has 1017 Blast hits to 654 proteins in 124 species: Archae−0; Bacteria−39; Metazoa−232; Fungi−69; Plants−40; Viruses−0; Other Eukaryotes−637 (source: NCBI BLink). | 0.37 | 0.00 | 0.34 | −0.03 | −0.38 |
257580_at | AT3G06210 | ARM repeat superfamily protein | 0.41 | 0.03 | 0.28 | −0.09 | −0.37 |
259384_at | AT3G16450 | Mannose-binding lectin superfamily protein | −0.05 | −0.42 | 0.62 | 0.25 | −0.37 |
250930_at | AT5G03160 | homolog of mamallian P58IPK | 0.24 | −0.14 | 0.05 | −0.32 | −0.37 |
263073_at | AT2G17500 | Auxin efflux carrier family protein | 0.22 | −0.16 | 0.47 | 0.09 | −0.37 |
262711_at | AT1G16500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−4; Plants−131; Viruses−1; Other Eukaryotes−0 (source: NCBI BLink). | 0.16 | −0.21 | 0.11 | −0.26 | −0.37 |
260087_at | AT1G73200 | Putative integral membrane protein conserved region (DUF2404) | 0.18 | −0.20 | 0.22 | −0.16 | −0.37 |
256188_at | AT1G30160 | Protein of unknown function (DUF295) | 0.15 | −0.22 | 0.28 | −0.09 | −0.37 |
253326_at | AT4G33440 | Pectin lyase-like superfamily protein | 0.36 | −0.01 | 0.20 | −0.17 | −0.37 |
259786_at | AT1G29660 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.33 | −0.04 | 0.36 | −0.01 | −0.37 |
258139_at | AT3G24520 | heat shock transcription factor C1 | 0.60 | 0.23 | 0.19 | −0.18 | −0.37 |
254053_s_at | AT4G25310 | [AT4G25310, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein];[AT4G25300, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] | 0.05 | −0.32 | 0.21 | −0.16 | −0.37 |
250167_at | AT5G15310 | myb domain protein 16 | 0.25 | −0.12 | 0.28 | −0.08 | −0.37 |
258724_at | AT3G09600 | Homeodomain-like superfamily protein | 0.10 | −0.27 | 0.19 | −0.18 | −0.37 |
258554_at | AT3G06980 | DEA(D/H)-box RNA helicase family protein | 0.33 | −0.04 | −0.03 | −0.40 | −0.37 |
255858_at | AT1G67030 | zinc finger protein 6 | 0.07 | −0.29 | 0.12 | −0.25 | −0.37 |
259640_at | AT1G52400 | beta glucosidase 18 | 0.21 | −0.16 | 0.51 | 0.14 | −0.36 |
263493_at | AT2G42520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 0.47 | 0.11 | −0.05 | −0.42 | −0.36 |
246235_at | AT4G36830 | GNS1/SUR4 membrane protein family | 0.14 | −0.22 | 0.08 | −0.29 | −0.36 |
261046_at | AT1G01390 | UDP-Glycosyltransferase superfamily protein | 0.67 | 0.31 | −0.37 | −0.73 | −0.36 |
261382_at | AT1G05470 | DNAse I-like superfamily protein | 0.18 | −0.18 | −0.01 | −0.37 | −0.36 |
252994_at | AT4G38480 | Transducin/WD40 repeat-like superfamily protein | 0.42 | 0.06 | 0.12 | −0.24 | −0.36 |
251887_at | AT3G54170 | FKBP12 interacting protein 37 | 0.37 | 0.01 | 0.04 | −0.33 | −0.36 |
266743_at | AT2G02990 | ribonuclease 1 | 0.17 | −0.20 | 0.91 | 0.55 | −0.36 |
247124_at | AT5G66060 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 0.31 | −0.05 | 0.04 | −0.32 | −0.36 |
---|---|---|---|---|---|---|---|
247486_at | AT5G62140 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae−0; Bacteria−14; Metazoa−0; Fungi−0; Plants−45; Viruses−0; Other Eukaryotes−1 (source: NCBI BLink). | 0.19 | −0.18 | 0.05 | −0.32 | −0.36 |
264898_at | AT1G23205 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 0.29 | −0.07 | 0.04 | −0.32 | −0.36 |
246468_at | AT5G17050 | UDP-glucosyl transferase 78D2 | 0.08 | −0.29 | 0.15 | −0.21 | −0.36 |
263788_at | AT2G24580 | FAD-dependent oxidoreductase family protein | 0.30 | −0.06 | 0.16 | −0.20 | −0.36 |
257735_at | AT3G27400 | Pectin lyase-like superfamily protein | 0.22 | −0.14 | 0.02 | −0.34 | −0.36 |
259680_at | AT1G77690 | like AUX1 3 | 0.42 | 0.06 | 0.21 | −0.15 | −0.36 |
263954_at | AT2G35840 | Sucrose-6F-phosphate phosphohydrolase family protein | 0.33 | −0.02 | 0.02 | −0.33 | −0.36 |
248092_at | AT5G55170 | small ubiquitin-like modifier 3 | 0.23 | −0.13 | −0.09 | −0.45 | −0.36 |
252937_at | AT4G39180 | Sec14p-like phosphatidylinositol transfer family protein | 0.32 | −0.04 | 0.23 | −0.13 | −0.36 |
256379_at | AT1G66840 | Plant protein of unknown function (DUF827) | 0.35 | −0.01 | 0.11 | −0.25 | −0.36 |
247965_at | AT5G56540 | arabinogalactan protein 14 | 0.21 | −0.15 | 0.39 | 0.03 | −0.36 |
257890_s_at | AT3G42570 | [AT3G42570, peroxidase family protein]; [AT3G17070, Peroxidase family protein] | 0.30 | −0.06 | 0.61 | 0.25 | −0.36 |
250682_x_at | AT5G06630 | proline-rich extensin-like family protein | 0.11 | −0.24 | 0.21 | −0.15 | −0.36 |
266479_at | AT2G31160 | Protein of unknown function (DUF640) | 0.35 | −0.01 | −0.09 | −0.44 | −0.36 |
267166_at | AT2G37720 | TRICHOME BIREFRINGENCE-LIKE 15 | 0.04 | −0.32 | 0.02 | −0.34 | −0.36 |
262773_at | AT1G13220 | nuclear matrix constituent protein-related | 0.42 | 0.07 | 0.22 | −0.14 | −0.35 |
265341_at | AT2G18360 | alpha/beta-Hydrolases superfamily protein | 0.18 | −0.18 | −0.07 | −0.42 | −0.35 |
267048_at | AT2G34200 | RING/FYVE/PHD zinc finger superfamily protein | 0.41 | 0.05 | 0.13 | −0.23 | −0.35 |
251647_at | AT3G57770 | Protein kinase superfamily protein | 0.45 | 0.10 | 0.13 | −0.22 | −0.35 |
246898_at | AT5G25580 | BEST Arabidopsis thaliana protein match is: DDT domain superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178 proteins in 75 species: Archae−0; Bacteria−4; Metazoa−51; Fungi−33; Plants−60; Viruses−1; Other Eukaryotes−29 (source: NCBI BLink). | 0.27 | −0.08 | 0.00 | −0.35 | −0.35 |
250446_at | AT5G10770 | Eukaryotic aspartyl protease family protein | 0.33 | −0.02 | 0.17 | −0.18 | −0.35 |
266000_at | AT2G24180 | cytochrome p450 71b6 | 0.20 | −0.15 | 0.20 | −0.15 | −0.35 |
253879_s_at | AT4G27560 | [AT4G27560, UDP-Glycosyltransferase superfamily protein];[AT4G27570, UDP-Glycosyltransferase superfamily protein] | 0.34 | −0.02 | 0.07 | −0.28 | −0.35 |
258726_at | AT3G11745 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−5; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.38 | 0.03 | 0.28 | −0.07 | −0.35 |
258201_at | AT3G13910 | Protein of unknown function (DUF3511) | 0.42 | 0.07 | 0.18 | −0.17 | −0.35 |
254350_at | AT4G22280 | F-box/RNI-like superfamily protein | 0.15 | −0.20 | 0.28 | −0.07 | −0.35 |
---|---|---|---|---|---|---|---|
262137_at | AT1G77920 | bZIP transcription factor family protein | 0.35 | 0.00 | 0.06 | −0.29 | −0.35 |
254190_at | AT4G23885 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.30 | −0.05 | 0.23 | −0.12 | −0.35 |
248136_at | AT5G54910 | DEA(D/H)-box RNA helicase family protein | 0.10 | −0.25 | 0.15 | −0.20 | −0.35 |
257793_at | AT3G26960 | Pollen Ole e 1 allergen and extensin family protein | 0.06 | −0.29 | 0.43 | 0.08 | −0.35 |
262482_at | AT1G17020 | Senescence-related gene 1 | 0.15 | −0.19 | 0.56 | 0.22 | −0.35 |
259794_at | AT1G64330 | myosin heavy chain-related | 0.36 | 0.01 | 0.07 | −0.28 | −0.35 |
259278_at | AT3G01160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro: IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae−109; Bacteria−2369; Metazoa−13796; Fungi−4858; Plants−1657; Viruses−489; Other Eukaryotes−13360 (source: NCBI BLink). | 0.35 | 0.00 | 0.10 | −0.25 | −0.35 |
260074_at | AT1G73640 | RAB GTPase homolog A6A | 0.20 | −0.15 | 0.14 | −0.20 | −0.35 |
256008_s_at | AT1G34040 | [AT1G34040, Pyridoxal phosphate (PLP)-dependent transferases superfamily protein];[AT1G34060, Pyridoxal phosphate (PLP)-dependent transferases superfamily protein] | 0.15 | −0.20 | 0.33 | −0.02 | −0.35 |
249626_at | AT5G37540 | Eukaryotic aspartyl protease family protein | 0.32 | −0.02 | 0.38 | 0.03 | −0.35 |
258211_at | AT3G17890 | unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae−0; Bacteria−4; Metazoa−5; Fungi−10; Plants−12; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.15 | −0.20 | 0.19 | −0.16 | −0.35 |
247189_at | AT5G65390 | arabinogalactan protein 7 | 0.15 | −0.19 | 0.31 | −0.04 | −0.35 |
250149_at | AT5G14700 | NAD(P)-binding Rossmann-fold superfamily protein | 0.35 | 0.01 | 0.21 | −0.14 | −0.35 |
263250_at | AT2G31390 | pfkB-like carbohydrate kinase family protein | 0.28 | −0.07 | −0.02 | −0.36 | −0.35 |
247678_at | AT5G59520 | ZRT/IRT-like protein 2 | 0.11 | −0.24 | 0.28 | −0.07 | −0.34 |
255278_at | AT4G04940 | transducin family protein/WD-40 repeat family protein | 0.23 | −0.11 | −0.12 | −0.46 | −0.34 |
261609_at | AT1G49740 | PLC-like phosphodiesterases superfamily protein | 0.34 | 0.00 | 0.12 | −0.22 | −0.34 |
250533_at | AT5G08640 | flavonol synthase 1 | 0.20 | −0.14 | −0.01 | −0.36 | −0.34 |
265483_at | AT2G15790 | peptidyl-prolyl cis-trans isomerase/cyclophilin-40 (CYP40)/rotamase | 0.32 | −0.03 | 0.06 | −0.28 | −0.34 |
253732_at | AT4G29140 | MATE efflux family protein | 0.29 | −0.05 | 0.08 | −0.26 | −0.34 |
259381_s_at | AT3G16410 | [AT3G16410, nitrile specifier protein 4]; [AT3G16390, nitrile specifier protein 3]; [AT3G16400, nitrile specifier protein 1] | 0.50 | 0.16 | 0.54 | 0.20 | −0.34 |
255587_at | AT4G01480 | pyrophosphorylase 5 | 0.00 | −0.34 | 0.17 | −0.17 | −0.34 |
252888_at | AT4G39210 | Glucose-1-phosphate adenylyltransferase family protein | 0.49 | 0.15 | −0.05 | −0.39 | −0.34 |
248596_at | AT5G49330 | myb domain protein 111 | 0.39 | 0.05 | 0.07 | −0.27 | −0.34 |
254907_at | AT4G11190 | Disease resistance-responsive (dirigent-like protein) family protein | 0.07 | −0.26 | 0.07 | −0.27 | −0.34 |
266219_at | AT2G28880 | para-aminobenzoate (PABA) synthase family protein | 0.25 | −0.09 | 0.26 | −0.08 | −0.34 |
---|---|---|---|---|---|---|---|
248553_at | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | 0.07 | −0.27 | 0.25 | −0.09 | −0.34 |
250043_at | AT5G18430 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.27 | −0.07 | 0.06 | −0.28 | −0.34 |
250528_at | AT5G08600 | U3 ribonucleoprotein (Utp) family protein | 0.32 | −0.01 | 0.10 | −0.24 | −0.34 |
266321_at | AT2G46660 | cytochrome P450, family 78, subfamily A, polypeptide 6 | 0.19 | −0.14 | 0.13 | −0.21 | −0.34 |
251298_at | AT3G62040 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | −0.06 | −0.40 | 0.33 | −0.01 | −0.34 |
248153_at | AT5G54250 | cyclic nucleotide-gated cation channel 4 | 0.23 | −0.10 | 0.22 | −0.11 | −0.34 |
247191_at | AT5G65310 | homeobox protein 5 | 0.36 | 0.02 | −0.12 | −0.46 | −0.34 |
259568_at | AT1G20490 | AMP-dependent synthetase and ligase family protein | 0.26 | −0.08 | 0.30 | −0.04 | −0.34 |
249266_at | AT5G41670 | 6-phosphogluconate dehydrogenase family protein | 0.27 | −0.06 | −0.11 | −0.44 | −0.34 |
250670_at | AT5G06860 | polygalacturonase inhibiting protein 1 | −0.07 | −0.40 | 0.29 | −0.05 | −0.33 |
250722_at | AT5G06190 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.39 | 0.05 | 0.11 | −0.22 | −0.33 |
258397_at | AT3G15357 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; Has 6931 Blast hits to 2036 proteins in 230 species: Archae−7; Bacteria−933; Metazoa−1824; Fungi−836; Plants−482; Viruses−218; Other Eukaryotes−2631 (source: NCBI BLink). | 0.16 | −0.18 | 0.19 | −0.14 | −0.33 |
258133_at | AT3G24500 | multiprotein bridging factor 1C | 0.11 | −0.22 | 1.49 | 1.16 | −0.33 |
253519_at | AT4G31240 | protein kinase C-like zinc finger protein | 0.20 | −0.13 | 0.59 | 0.26 | −0.33 |
258472_at | AT3G06080 | Plant protein of unknown function (DUF828) | 0.43 | 0.09 | 0.24 | −0.10 | −0.33 |
257902_at | AT3G28450 | Leucine-rich repeat protein kinase family protein | 0.23 | −0.10 | 0.25 | −0.08 | −0.33 |
261032_at | AT1G17430 | alpha/beta-Hydrolases superfamily protein | 0.23 | −0.10 | −0.05 | −0.38 | −0.33 |
263085_at | AT2G16090 | RING/U-box superfamily protein | 0.11 | −0.23 | 0.35 | 0.01 | −0.33 |
255081_at | AT4G09140 | MUTL-homologue 1 | 0.08 | −0.25 | 0.12 | −0.22 | −0.33 |
256021_at | AT1G58270 | TRAF-like family protein | 0.30 | −0.03 | 0.21 | −0.12 | −0.33 |
264479_at | AT1G77280 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | 0.13 | −0.20 | 0.30 | −0.03 | −0.33 |
256910_at | AT3G24080 | KRR1 family protein | 0.38 | 0.05 | 0.01 | −0.32 | −0.33 |
264884_at | AT1G61170 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae−0; Bacteria−0; Metazoa−17; Fungi−0; Plants−34; Viruses−1; Other Eukaryotes−2 (source: NCBI BLink). | 0.32 | −0.01 | 0.06 | −0.27 | −0.33 |
259507_at | AT1G43910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 0.51 | 0.18 | −0.08 | −0.41 | −0.33 |
267302_at | AT2G30105 | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). | 0.26 | −0.07 | 0.07 | −0.26 | −0.33 |
---|---|---|---|---|---|---|---|
246340_s_at | AT3G44860 | [AT3G44860, farnesoic acid carboxyl-O-methyltransferase]; [AT3G44870, S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] | 0.13 | −0.20 | 0.64 | 0.31 | −0.33 |
252997_at | AT4G38400 | expansin-like A2 | 0.40 | 0.07 | 0.11 | −0.22 | −0.33 |
251637_at | AT3G57570 | ARM repeat superfamily protein | 0.20 | −0.13 | 0.18 | −0.15 | −0.33 |
260547_at | AT2G43550 | Scorpion toxin-like knottin superfamily protein | 0.05 | −0.28 | 0.04 | −0.29 | −0.33 |
264851_at | AT2G17290 | Calcium-dependent protein kinase family protein | 0.01 | −0.32 | −0.03 | −0.36 | −0.33 |
250541_at | AT5G09520 | hydroxyproline-rich glycoprotein family protein | −0.02 | −0.35 | 0.20 | −0.13 | −0.33 |
261957_at | AT1G64660 | methionine gamma-lyase | 0.62 | 0.29 | 0.43 | 0.10 | −0.33 |
249092_at | AT5G43710 | Glycosyl hydrolase family 47 protein | 0.33 | 0.00 | 0.12 | −0.21 | −0.33 |
258252_at | AT3G15720 | Pectin lyase-like superfamily protein | 0.09 | −0.24 | 0.17 | −0.16 | −0.33 |
264475_s_at | AT1G77150 | [AT1G77150, Pentatricopeptide repeat (PPR) superfamily protein];[AT1G77170, Tetratricopeptide repeat (TPR)-like superfamily protein] | 0.39 | 0.07 | 0.10 | −0.22 | −0.33 |
250985_at | AT5G02830 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.30 | −0.03 | 0.07 | −0.26 | −0.33 |
249459_at | AT5G39580 | Peroxidase superfamily protein | 0.07 | −0.26 | 0.54 | 0.22 | −0.33 |
266781_at | AT2G28940 | Protein kinase superfamily protein | 0.15 | −0.18 | 0.15 | −0.17 | −0.33 |
255881_at | AT1G67070 | Mannose-6-phosphate isomerase, type I | 0.00 | −0.33 | 0.35 | 0.02 | −0.33 |
255065_s_at | AT4G08870 | [AT4G08870, Arginase/deacetylase superfamily protein]; [AT4G08900, arginase] | 0.03 | −0.30 | 0.61 | 0.28 | −0.33 |
260701_at | AT1G32330 | heat shock transcription factor A1D | 0.15 | −0.17 | 0.23 | −0.10 | −0.33 |
266532_at | AT2G16890 | UDP-Glycosyltransferase superfamily protein | 0.69 | 0.36 | 0.00 | −0.33 | −0.33 |
261106_at | AT1G62990 | KNOTTED-like homeobox of Arabidopsis thaliana 7 | 0.29 | −0.04 | 0.37 | 0.04 | −0.33 |
258990_at | AT3G08840 | D-alanine--D-alanine ligase family | 0.11 | −0.21 | 0.55 | 0.23 | −0.33 |
255926_at | AT1G22190 | Integrase-type DNA-binding superfamily protein | −0.01 | −0.34 | 0.14 | −0.18 | −0.33 |
254812_at | AT4G12250 | UDP-D-glucuronate 4-epimerase 5 | 0.18 | −0.15 | 0.18 | −0.15 | −0.33 |
257112_at | AT3G20120 | cytochrome P450, family 705, subfamily A, polypeptide 21 | 0.23 | −0.10 | 0.06 | −0.27 | −0.33 |
254389_s_at | AT4G21903 | [AT4G21903, MATE efflux family protein]; [AT4G21910, MATE efflux family protein] | 0.28 | −0.05 | 0.40 | 0.08 | −0.33 |
259379_at | AT3G16350 | Homeodomain-like superfamily protein | 0.26 | −0.06 | 0.20 | −0.12 | −0.32 |
254447_at | AT4G20860 | FAD-binding Berberine family protein | 0.00 | −0.32 | 0.49 | 0.16 | −0.32 |
261922_at | AT1G65890 | acyl activating enzyme 12 | 0.35 | 0.02 | 0.26 | −0.07 | −0.32 |
256623_at | AT3G19960 | myosin 1 | 0.34 | 0.01 | 0.17 | −0.15 | −0.32 |
264567_s_at | AT1G05250 | [AT1G05250, Peroxidase superfamily protein]; [AT1G05240, Peroxidase superfamily protein] | 0.21 | −0.12 | 0.39 | 0.06 | −0.32 |
259977_at | AT1G76590 | PLATZ transcription factor family protein | 0.15 | −0.18 | 0.04 | −0.28 | −0.32 |
260718_at | AT1G48110 | evolutionarily conserved C-terminal region 7 | 0.10 | −0.22 | 0.02 | −0.31 | −0.32 |
246420_at | AT5G16870 | Peptidyl-tRNA hydrolase II (PTH2) family protein | 0.37 | 0.05 | −0.03 | −0.35 | −0.32 |
---|---|---|---|---|---|---|---|
251086_at | AT5G01450 | RING/U-box superfamily protein | 0.16 | −0.17 | 0.21 | −0.11 | −0.32 |
262643_at | AT1G62770 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 0.34 | 0.02 | 0.17 | −0.15 | −0.32 |
253344_at | AT4G33550 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | 0.46 | 0.14 | 0.55 | 0.23 | −0.32 |
254413_at | AT4G21440 | MYB-like 102 | 0.08 | −0.24 | 0.22 | −0.10 | −0.32 |
246099_at | AT5G20230 | blue-copper-binding protein | −0.27 | −0.59 | 0.56 | 0.24 | −0.32 |
255004_at | AT4G09970 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae−0; Bacteria−2; Metazoa−0; Fungi−0; Plants−13; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.24 | −0.08 | 0.07 | −0.25 | −0.32 |
260090_at | AT1G73310 | serine carboxypeptidase−like 4 | 0.23 | −0.09 | 0.14 | −0.18 | −0.32 |
266415_at | AT2G38530 | lipid transfer protein 2 | 0.70 | 0.38 | 0.33 | 0.00 | −0.32 |
264183_at | AT1G65380 | Leucine-rich repeat (LRR) family protein | 0.21 | −0.11 | 0.11 | −0.22 | −0.32 |
255777_at | AT1G18630 | glycine-rich RNA-binding protein 6 | 0.29 | −0.03 | 0.04 | −0.28 | −0.32 |
249410_at | AT5G40380 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42 | 0.02 | −0.30 | 0.20 | −0.12 | −0.32 |
262618_at | AT1G06560 | NOL1/NOP2/sun family protein | 0.25 | −0.07 | 0.18 | −0.15 | −0.32 |
248472_at | AT5G50860 | Protein kinase superfamily protein | 0.23 | −0.10 | 0.20 | −0.12 | −0.32 |
253913_at | AT4G27370 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 0.27 | −0.05 | 0.25 | −0.07 | −0.32 |
262671_at | AT1G76040 | calcium-dependent protein kinase 29 | 0.29 | −0.03 | 0.21 | −0.11 | −0.32 |
248693_at | AT5G48330 | Regulator of chromosome condensation (RCC1) family protein | 0.33 | 0.01 | 0.19 | −0.14 | −0.32 |
246494_at | AT5G16190 | cellulose synthase like A11 | 0.10 | −0.22 | 0.51 | 0.19 | −0.32 |
251910_at | AT3G53810 | Concanavalin A-like lectin protein kinase family protein | 0.09 | −0.23 | 0.17 | −0.15 | −0.32 |
261907_at | AT1G65060 | 4-coumarate:CoA ligase 3 | 0.27 | −0.05 | 0.03 | −0.29 | −0.32 |
245123_at | AT2G47450 | chloroplast signal recognition particle component (CAO) | 0.35 | 0.03 | 0.16 | −0.16 | −0.32 |
247464_at | AT5G62070 | IQ-domain 23 | 0.05 | −0.27 | 0.15 | −0.17 | −0.32 |
264908_at | AT2G17440 | plant intracellular ras group-related LRR 5 | 0.24 | −0.08 | 0.33 | 0.01 | −0.32 |
256205_at | AT1G50890 | ARM repeat superfamily protein | 0.17 | −0.15 | 0.19 | −0.13 | −0.32 |
258923_at | AT3G10450 | serine carboxypeptidase-like 7 | 0.28 | −0.04 | 0.38 | 0.06 | −0.32 |
253639_at | AT4G30550 | Class I glutamine amidotransferase-like superfamily protein | 0.12 | −0.20 | 0.43 | 0.12 | −0.32 |
247878_at | AT5G57760 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−5; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.32 | 0.00 | −0.41 | −0.73 | −0.32 |
266290_at | AT2G29490 | glutathione S-transferase TAU 1 | −0.01 | −0.33 | 0.17 | −0.15 | −0.32 |
251509_at | AT3G59010 | pectin methylesterase 61 | 0.21 | −0.10 | 0.32 | 0.00 | −0.32 |
263174_at | AT1G54040 | epithiospecifier protein | 0.19 | −0.12 | 0.22 | −0.10 | −0.32 |
255786_at | AT1G19670 | chlorophyllase 1 | 0.09 | −0.22 | 0.89 | 0.58 | −0.32 |
260211_at | AT1G74440 | Protein of unknown function (DUF962) | 0.02 | −0.29 | −0.17 | −0.49 | −0.32 |
245074_at | AT2G23200 | Protein kinase superfamily protein | 0.08 | −0.23 | 0.00 | −0.31 | −0.32 |
264289_at | AT1G61890 | MATE efflux family protein | 0.24 | −0.08 | 0.39 | 0.08 | −0.32 |
---|---|---|---|---|---|---|---|
262745_at | AT1G28600 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.00 | −0.31 | 0.09 | −0.22 | −0.32 |
251140_at | AT5G01090 | Concanavalin A-like lectin family protein | 0.35 | 0.03 | 0.16 | −0.16 | −0.32 |
254238_at | AT4G23540 | ARM repeat superfamily protein | 0.33 | 0.02 | 0.00 | −0.32 | −0.31 |
260262_at | AT1G68470 | Exostosin family protein | 0.33 | 0.02 | 0.22 | −0.10 | −0.31 |
260585_at | AT2G43650 | Sas10/U3 ribonucleoprotein (Utp) family protein | 0.30 | −0.01 | 0.04 | −0.27 | −0.31 |
259705_at | AT1G77450 | NAC domain containing protein 32 | 0.29 | −0.02 | 0.47 | 0.15 | −0.31 |
266356_at | AT2G32300 | uclacyanin 1 | 0.18 | −0.13 | 0.18 | −0.14 | −0.31 |
263150_at | AT1G54050 | HSP20-like chaperones superfamily protein | 0.21 | −0.10 | 0.55 | 0.24 | −0.31 |
253209_at | AT4G34830 | Pentatricopeptide repeat (PPR) superfamily protein | 0.40 | 0.09 | −0.12 | −0.43 | −0.31 |
261526_at | AT1G14370 | protein kinase 2A | 0.25 | −0.07 | 0.09 | −0.22 | −0.31 |
245297_at | AT4G16510 | YbaK/aminoacyl-tRNA synthetase-associated domain | 0.26 | −0.05 | 0.10 | −0.21 | −0.31 |
256571_at | AT3G30730 | unknown protein; Has 59 Blast hits to 59 proteins in 7 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−59; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.06 | −0.25 | 0.38 | 0.07 | −0.31 |
248294_at | AT5G53060 | RNA-binding KH domain-containing protein | 0.27 | −0.04 | 0.16 | −0.16 | −0.31 |
263706_s_at | AT1G31180 | [AT1G31180, isopropylmalate dehydrogenase 3]; [AT5G14200, isopropylmalate dehydrogenase 1] | 0.22 | −0.10 | 0.31 | 0.00 | −0.31 |
262340_at | AT1G64100 | [AT1G64100, pentatricopeptide (PPR) repeat-containing protein]; [AT1G64105, NAC domain containing protein 27] | 0.23 | −0.08 | 0.23 | −0.08 | −0.31 |
259143_at | AT3G10190 | Calcium-binding EF-hand family protein | 0.15 | −0.16 | 0.13 | −0.18 | −0.31 |
253029_at | AT4G38170 | FAR1-related sequence 9 | 0.28 | −0.03 | 0.13 | −0.18 | −0.31 |
257339_s_at | ATMG00040 | [ATMG00040, ATP synthase subunit C family protein]; [AT2G07671, ATP synthase subunit C family protein]; [ATMG01080, mitochondrial F0-ATPase subunit 9] | 0.23 | −0.08 | 0.72 | 0.40 | −0.31 |
259746_at | AT1G71060 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.23 | −0.08 | 0.04 | −0.27 | −0.31 |
256050_at | AT1G07000 | exocyst subunit exo70 family protein B2 | 0.19 | −0.12 | 0.10 | −0.21 | −0.31 |
249286_at | AT5G41580 | RING/U-box superfamily protein | 0.19 | −0.12 | 0.24 | −0.07 | −0.31 |
258742_at | AT3G05800 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 | 0.38 | 0.07 | −0.15 | −0.46 | −0.31 |
246968_at | AT5G24870 | RING/U-box superfamily protein | 0.34 | 0.03 | 0.34 | 0.03 | −0.31 |
263684_at | AT1G26900 | Pentatricopeptide repeat (PPR) superfamily protein | 0.09 | −0.22 | 0.23 | −0.08 | −0.31 |
247305_at | AT5G63905 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.06 | −0.25 | 0.20 | −0.11 | −0.31 |
262659_at | AT1G14240 | GDA1/CD39 nucleoside phosphatase family protein | 0.13 | −0.18 | 0.21 | −0.10 | −0.31 |
245346_at | AT4G17090 | chloroplast beta-amylase | 0.33 | 0.02 | −0.26 | −0.57 | −0.31 |
250762_at | AT5G05990 | Mitochondrial glycoprotein family protein | 0.08 | −0.23 | 0.09 | −0.22 | −0.31 |
265672_at | AT2G31980 | PHYTOCYSTATIN 2 | 0.40 | 0.09 | 0.28 | −0.03 | −0.31 |
---|---|---|---|---|---|---|---|
264771_at | AT1G22940 | thiamin biosynthesis protein, putative | 0.31 | 0.00 | −0.07 | −0.38 | −0.31 |
264902_at | AT1G23060 | BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR: AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species: Archae−0; Bacteria−40; Metazoa−139; Fungi−21; Plants−158; Viruses−3; Other Eukaryotes−88 (source: NCBI BLink). | 0.30 | −0.01 | 0.21 | −0.10 | −0.31 |
250494_at | AT5G09740 | histone acetyltransferase of the MYST family 2 | 0.17 | −0.14 | 0.21 | −0.10 | −0.31 |
245747_at | AT1G51100 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−26; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.19 | −0.11 | 0.14 | −0.16 | −0.31 |
251752_at | AT3G55740 | proline transporter 2 | 0.41 | 0.10 | 0.00 | −0.30 | −0.31 |
253485_at | AT4G31800 | WRKY DNA-binding protein 18 | −0.03 | −0.34 | 0.16 | −0.15 | −0.31 |
255121_at | AT4G08480 | mitogen-activated protein kinase kinase kinase 9 | 0.17 | −0.14 | 0.04 | −0.27 | −0.31 |
263156_at | AT1G54030 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.34 | 0.04 | 0.24 | −0.06 | −0.31 |
252194_at | AT3G50110 | PTEN 3 | 0.14 | −0.16 | 0.20 | −0.11 | −0.31 |
249983_at | AT5G18470 | Curculin-like (mannose-binding) lectin family protein | 0.01 | −0.29 | 0.01 | −0.30 | −0.31 |
248952_at | AT5G45410 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae−2; Bacteria−31; Metazoa−0; Fungi−0; Plants−91; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | 0.14 | −0.16 | 0.33 | 0.03 | −0.31 |
258214_at | AT3G17970 | translocon at the outer membrane of chloroplasts 64−III | 0.28 | −0.02 | 0.01 | −0.29 | −0.31 |
249991_at | AT5G18550 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.36 | 0.06 | 0.11 | −0.20 | −0.30 |
263274_at | AT2G11520 | calmodulin-binding receptor-like cytoplasmic kinase 3 | 0.17 | −0.13 | 0.05 | −0.25 | −0.30 |
254161_at | AT4G24370 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.08 | −0.23 | 0.28 | −0.02 | −0.30 |
259574_at | AT1G35310 | MLP-like protein 168 | 0.23 | −0.08 | 0.10 | −0.21 | −0.30 |
256751_at | AT3G27170 | chloride channel B | 0.05 | −0.26 | 0.17 | −0.13 | −0.30 |
250955_at | AT5G03190 | conserved peptide upstream open reading frame 47 | 0.38 | 0.07 | 0.23 | −0.07 | −0.30 |
257207_at | AT3G14900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae−47; Bacteria−1684; Metazoa−5536; Fungi−2506; Plants−1043; Viruses−361; Other Eukaryotes−5958 (source: NCBI BLink). | 0.14 | −0.16 | −0.12 | −0.42 | −0.30 |
259985_at | AT1G76620 | Protein of unknown function, DUF547 | 0.27 | −0.03 | 0.07 | −0.24 | −0.30 |
258003_at | AT3G29030 | expansin A5 | 0.33 | 0.03 | 0.14 | −0.16 | −0.30 |
265200_s_at | AT2G36800 | [AT2G36800, don-glucosyltransferase 1]; [AT2G36790, UDP-glucosyl transferase 73C6] | 0.24 | −0.07 | 0.13 | −0.18 | −0.30 |
260367_at | AT1G69760 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26920.1); Has 51 Blast hits to 51 proteins in 15 species: Archae−0; Bacteria−2; Metazoa−2; Fungi−7; Plants−29; Viruses−0; Other Eukaryotes−11 (source: NCBI BLink). | 0.29 | −0.02 | 0.23 | −0.07 | −0.30 |
---|---|---|---|---|---|---|---|
255900_at | AT1G17830 | Protein of unknown function (DUF789) | 0.07 | −0.24 | 0.23 | −0.08 | −0.30 |
246133_at | AT5G20960 | aldehyde oxidase 1 | 0.45 | 0.15 | −0.13 | −0.43 | −0.30 |
247210_at | AT5G65020 | annexin 2 | 0.31 | 0.01 | 0.16 | −0.14 | −0.30 |
256291_at | AT3G12200 | NIMA-related kinase 7 | 0.19 | −0.11 | 0.04 | −0.27 | −0.30 |
264271_at | AT1G60270 | beta glucosidase 6 | 0.22 | −0.08 | 0.42 | 0.12 | −0.30 |
263734_at | AT1G60030 | nucleobase-ascorbate transporter 7 | 0.25 | −0.05 | 0.13 | −0.17 | −0.30 |
261335_at | AT1G44800 | nodulin MtN21 /EamA-like transporter family protein | 0.11 | −0.19 | −0.08 | −0.38 | −0.30 |
262220_at | AT1G74740 | calcium-dependent protein kinase 30 | 0.15 | −0.15 | 0.29 | −0.02 | −0.30 |
255032_at | AT4G09500 | UDP-Glycosyltransferase superfamily protein | 0.30 | 0.00 | 0.25 | −0.05 | −0.30 |
247248_at | AT5G64560 | magnesium transporter 9 | 0.22 | −0.08 | 0.11 | −0.19 | −0.30 |
263586_at | AT2G25350 | Phox (PX) domain-containing protein | 0.20 | −0.10 | 0.23 | −0.07 | −0.30 |
ID | Locus | Description | Treatment Effects | FR effect ratio 26˚C/22˚C | |||
---|---|---|---|---|---|---|---|
<1> W+FR effect (22˚C) | <2> W+FR effect (26˚C) | <3> 26˚C effect (WL) | <4> 26˚C effect (W+FR) | ||||
260371_at | AT1G69690 | TCP family transcription factor | −0.20 | 0.10 | −0.17 | 0.13 | 0.30 |
262607_at | AT1G13990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 25 Blast hits to 25 proteins in 8 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−25; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.28 | 0.02 | 0.46 | 0.76 | 0.30 |
246211_at | AT4G36730 | G-box binding factor 1 | −0.27 | 0.04 | −0.02 | 0.28 | 0.30 |
245845_at | AT1G26150 | proline-rich extensin-like receptor kinase 10 | −0.25 | 0.06 | 0.03 | 0.33 | 0.30 |
251497_at | AT3G59060 | phytochrome interacting factor 3-like 6 (PIF5) | −0.12 | 0.18 | 0.09 | 0.39 | 0.30 |
262635_at | AT1G06570 | phytoene desaturation 1 | −0.30 | 0.00 | 0.13 | 0.43 | 0.30 |
244990_s_at | ATCG00870 | [ATCG00870, Protein precursor Ycf15, putative, chloroplast];[ATCG01270, Protein precursor Ycf15, putative, chloroplast] | 0.29 | 0.59 | 0.32 | 0.62 | 0.30 |
245049_at | ATCG00050 | ribosomal protein S16 | −0.19 | 0.12 | −0.36 | −0.06 | 0.30 |
261165_at | AT1G34430 | 2-oxoacid dehydrogenases acyltransferase family protein | −0.21 | 0.10 | −0.22 | 0.08 | 0.30 |
254683_at | AT4G13800 | Protein of unknown function (DUF803) | −0.16 | 0.14 | −0.08 | 0.23 | 0.30 |
259544_at | AT1G20620 | catalase 3 | −0.41 | −0.10 | 0.28 | 0.58 | 0.30 |
248014_at | AT5G56340 | RING/U-box superfamily protein | −0.10 | 0.20 | −0.20 | 0.10 | 0.30 |
264899_at | AT1G23130 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | −0.14 | 0.16 | −0.04 | 0.26 | 0.30 |
---|---|---|---|---|---|---|---|
253597_at | AT4G30690 | Translation initiation factor 3 protein | −0.34 | −0.03 | 0.01 | 0.32 | 0.30 |
249378_at | AT5G40450 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | −0.27 | 0.03 | −0.15 | 0.15 | 0.30 |
247958_at | AT5G57070 | Hydroxyproline-rich glycoprotein family protein | −0.14 | 0.17 | −0.18 | 0.13 | 0.30 |
251154_at | AT3G63110 | isopentenyltransferase 3 | −0.31 | 0.00 | −0.38 | −0.08 | 0.31 |
255460_at | AT4G02800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae−13; Bacteria−213; Metazoa−1207; Fungi−247; Plants−183; Viruses−21; Other Eukaryotes−1325 (source: NCBI BLink). | −0.11 | 0.20 | −0.25 | 0.05 | 0.31 |
248342_at | AT5G52230 | methyl-CPG-binding domain protein 13 | −0.12 | 0.18 | −0.09 | 0.21 | 0.31 |
253003_s_at | AT4G38300 | [AT4G38300, glycosyl hydrolase family 10 protein]; [AT4G38650, Glycosyl hydrolase family 10 protein] | −0.14 | 0.16 | −0.08 | 0.22 | 0.31 |
247066_at | AT5G66940 | Dof-type zinc finger DNA-binding family protein | −0.28 | 0.03 | −0.15 | 0.16 | 0.31 |
267428_at | AT2G34840 | Coatomer epsilon subunit | −0.06 | 0.24 | −0.06 | 0.24 | 0.31 |
253875_at | AT4G27520 | early nodulin-like protein 2 | −0.27 | 0.04 | −0.16 | 0.15 | 0.31 |
254826_at | AT4G12640 | RNA recognition motif (RRM)-containing protein | −0.07 | 0.24 | −0.14 | 0.17 | 0.31 |
253881_at | AT4G27640 | ARM repeat superfamily protein | 0.11 | 0.42 | −0.11 | 0.20 | 0.31 |
266106_at | AT2G45170 | AUTOPHAGY 8E | −0.35 | −0.05 | 0.16 | 0.47 | 0.31 |
255602_at | AT4G01026 | PYR1-like 7 | −0.42 | −0.11 | 0.16 | 0.47 | 0.31 |
266072_at | AT2G18700 | trehalose phosphatase/synthase 11 | −0.29 | 0.02 | −0.07 | 0.24 | 0.31 |
251365_at | AT3G61310 | AT hook motif DNA-binding family protein | −0.14 | 0.17 | −0.28 | 0.03 | 0.31 |
253051_at | AT4G37490 | CYCLIN B1;1 | −0.11 | 0.20 | −0.40 | −0.09 | 0.31 |
256812_at | AT3G21350 | RNA polymerase transcriptional regulation mediator-related | −0.17 | 0.14 | −0.08 | 0.23 | 0.31 |
257628_at | AT3G26290 | cytochrome P450, family 71, subfamily B, polypeptide 26 | −0.36 | −0.05 | 0.25 | 0.56 | 0.31 |
267232_at | AT2G44190 | Family of unknown function (DUF566) | −0.20 | 0.11 | −0.24 | 0.07 | 0.31 |
260192_at | AT1G67630 | DNA polymerase alpha 2 | −0.14 | 0.17 | −0.19 | 0.12 | 0.31 |
248352_at | AT5G52300 | CAP160 protein | −0.03 | 0.29 | −0.01 | 0.31 | 0.31 |
250470_at | AT5G10160 | Thioesterase superfamily protein | −0.19 | 0.13 | 0.02 | 0.33 | 0.31 |
255094_at | AT4G08590 | ORTHRUS-like | −0.07 | 0.24 | −0.16 | 0.15 | 0.31 |
266516_at | AT2G47880 | Glutaredoxin family protein | 0.64 | 0.96 | −0.33 | −0.01 | 0.31 |
267171_at | AT2G37590 | DNA binding with one finger 2.4 | −0.20 | 0.12 | −0.08 | 0.24 | 0.31 |
245330_at | AT4G14930 | Survival protein SurE-like phosphatase/nucleotidase | −0.14 | 0.17 | −0.09 | 0.23 | 0.32 |
267354_at | AT2G39880 | myb domain protein 25 | −0.12 | 0.19 | −0.17 | 0.15 | 0.32 |
---|---|---|---|---|---|---|---|
264529_at | AT1G30820 | CTP synthase family protein | −0.06 | 0.26 | −0.53 | −0.21 | 0.32 |
245719_at | AT5G04110 | DNA GYRASE B3 | −0.02 | 0.30 | −0.07 | 0.25 | 0.32 |
247356_at | AT5G63800 | Glycosyl hydrolase family 35 protein | −0.37 | −0.05 | 0.14 | 0.46 | 0.32 |
261700_at | AT1G32690 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−45; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.17 | 0.15 | −0.28 | 0.04 | 0.32 |
259022_at | AT3G07420 | asparaginyl-tRNA synthetase 2 | −0.13 | 0.19 | 0.03 | 0.35 | 0.32 |
256152_at | AT1G55150 | DEA(D/H)-box RNA helicase family protein | −0.27 | 0.06 | −0.11 | 0.21 | 0.32 |
260431_at | AT1G68190 | B-box zinc finger family protein | −0.35 | −0.03 | 0.22 | 0.55 | 0.32 |
247332_at | AT5G63440 | Protein of unknown function (DUF167) | 0.02 | 0.34 | −0.28 | 0.04 | 0.32 |
253182_at | AT4G35190 | Putative lysine decarboxylase family protein | 0.16 | 0.49 | 0.08 | 0.41 | 0.32 |
258828_at | AT3G07130 | purple acid phosphatase 15 | −0.15 | 0.17 | −0.11 | 0.22 | 0.33 |
254327_at | AT4G22490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.09 | 0.24 | 0.28 | 0.60 | 0.33 |
266719_at | AT2G46830 | circadian clock associated 1 | −0.31 | 0.01 | 0.07 | 0.39 | 0.33 |
251024_at | AT5G02180 | Transmembrane amino acid transporter family protein | −0.37 | −0.04 | −0.14 | 0.19 | 0.33 |
263391_at | AT2G11810 | monogalactosyldiacylglycerol synthase type C | −0.49 | −0.16 | −0.22 | 0.10 | 0.33 |
251588_at | AT3G58090 | Disease resistance-responsive (dirigent-like protein) family protein | −0.07 | 0.25 | −0.20 | 0.13 | 0.33 |
260011_at | AT1G68110 | ENTH/ANTH/VHS superfamily protein | −0.25 | 0.07 | 0.02 | 0.35 | 0.33 |
254998_at | AT4G09760 | Protein kinase superfamily protein | −0.22 | 0.11 | −0.15 | 0.18 | 0.33 |
253666_at | AT4G30270 | xyloglucan endotransglucosylase/hydrolase 24 | −0.41 | −0.08 | 0.53 | 0.86 | 0.33 |
259792_at | AT1G29690 | MAC/Perforin domain-containing protein | −0.31 | 0.02 | −0.23 | 0.09 | 0.33 |
254818_at | AT4G12470 | azelaic acid induced 1 | −0.84 | −0.51 | 0.02 | 0.35 | 0.33 |
250478_at | AT5G10250 | Phototropic-responsive NPH3 family protein | −0.15 | 0.18 | 0.11 | 0.44 | 0.33 |
256125_at | AT1G18250 | Pathogenesis-related thaumatin superfamily protein | −0.15 | 0.18 | −0.27 | 0.06 | 0.33 |
266944_at | no_match | no_match | −0.24 | 0.09 | −0.13 | 0.20 | 0.33 |
252332_at | AT3G48810 | Pentatricopeptide repeat (PPR) superfamily protein | −0.20 | 0.13 | −0.18 | 0.15 | 0.33 |
254051_at | AT4G25270 | Tetratricopeptide repeat (TPR)-like superfamily protein | −0.13 | 0.20 | −0.30 | 0.03 | 0.33 |
266101_at | AT2G37940 | Arabidopsis Inositol phosphorylceramide synthase 2 | −0.18 | 0.15 | −0.36 | −0.03 | 0.33 |
258497_at | AT3G02380 | CONSTANS-like 2 | −0.57 | −0.23 | −0.03 | 0.30 | 0.33 |
260603_at | AT1G55960 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | −0.29 | 0.04 | −0.01 | 0.33 | 0.33 |
255061_at | AT4G08930 | APR-like 6 | −0.39 | −0.06 | −0.16 | 0.17 | 0.34 |
260276_at | AT1G80450 | VQ motif-containing protein | −0.17 | 0.17 | −0.32 | 0.01 | 0.34 |
249505_at | AT5G38870 | transposable element gene | −0.11 | 0.23 | −0.27 | 0.07 | 0.34 |
---|---|---|---|---|---|---|---|
261613_at | AT1G49720 | abscisic acid responsive element-binding factor 1 | 0.02 | 0.36 | −0.42 | −0.08 | 0.34 |
252414_at | AT3G47420 | phosphate starvation-induced gene 3 | −0.48 | −0.14 | 0.21 | 0.54 | 0.34 |
256532_at | AT1G33350 | Pentatricopeptide repeat (PPR) superfamily protein | −0.13 | 0.21 | −0.15 | 0.19 | 0.34 |
260799_at | AT1G78270 | UDP-glucosyl transferase 85A4 | −0.28 | 0.06 | −0.39 | −0.06 | 0.34 |
260393_at | AT1G73920 | alpha/beta-Hydrolases superfamily protein | −0.28 | 0.06 | −0.19 | 0.14 | 0.34 |
262396_at | AT1G49470 | Family of unknown function (DUF716) | −0.16 | 0.18 | −0.15 | 0.18 | 0.34 |
253701_at | AT4G29890 | choline monooxygenase, putative (CMO-like) | −0.24 | 0.10 | 0.05 | 0.39 | 0.34 |
256873_at | AT3G26310 | cytochrome P450, family 71, subfamily B, polypeptide 35 | −0.17 | 0.16 | −0.18 | 0.16 | 0.34 |
246782_at | AT5G27320 | alpha/beta-Hydrolases superfamily protein | 0.03 | 0.37 | −0.17 | 0.17 | 0.34 |
255036_at | AT4G09560 | Protease-associated (PA) RING/U-box zinc finger family protein | −0.31 | 0.03 | −0.15 | 0.19 | 0.34 |
267525_at | AT2G30560 | glycine-rich protein | −0.14 | 0.20 | −0.15 | 0.19 | 0.34 |
251172_at | AT3G63190 | ribosome recycling factor, chloroplast precursor | −0.24 | 0.11 | −0.27 | 0.07 | 0.34 |
267262_at | AT2G22990 | sinapoylglucose 1 | −0.54 | −0.20 | 0.15 | 0.50 | 0.34 |
246935_at | AT5G25350 | EIN3-binding F box protein 2 | −0.06 | 0.28 | −0.38 | −0.04 | 0.34 |
256320_at | AT3G12170 | Chaperone DnaJ-domain superfamily protein | −0.12 | 0.22 | −0.37 | −0.02 | 0.34 |
258434_at | AT3G16770 | ethylene-responsive element binding protein | −0.11 | 0.23 | 0.08 | 0.43 | 0.34 |
245828_at | AT1G57820 | Zinc finger (C3HC4-type RING finger) family protein | −0.09 | 0.25 | −0.08 | 0.26 | 0.34 |
263036_at | AT1G23890 | NHL domain-containing protein | −0.26 | 0.08 | −0.19 | 0.15 | 0.34 |
266917_at | AT2G45830 | downstream target of AGL15 2 | −0.10 | 0.24 | −0.13 | 0.21 | 0.35 |
261972_at | AT1G64600 | methyltransferases;copper ion binding | −0.25 | 0.10 | −0.30 | 0.05 | 0.35 |
246880_s_at | AT5G26000 | [AT5G26000, thioglucoside glucohydrolase 1]; [AT5G25980, glucoside glucohydrolase 2] | −0.34 | 0.01 | 0.06 | 0.41 | 0.35 |
247243_at | AT5G64700 | nodulin MtN21 /EamA-like transporter family protein | −0.07 | 0.28 | −0.19 | 0.16 | 0.35 |
255957_at | AT1G22160 | Protein of unknown function (DUF581) | 0.17 | 0.52 | 0.13 | 0.48 | 0.35 |
254625_at | AT4G18470 | negative regulator of systemic acquired resistance (SNI1) | −0.13 | 0.23 | −0.17 | 0.19 | 0.35 |
262479_at | AT1G11130 | Leucine-rich repeat protein kinase family protein | −0.07 | 0.28 | −0.30 | 0.05 | 0.35 |
258239_at | AT3G27690 | photosystem II light harvesting complex gene 2.3 | −0.57 | −0.22 | −0.06 | 0.29 | 0.35 |
247696_at | AT5G59780 | myb domain protein 59 | −0.47 | −0.12 | 0.26 | 0.61 | 0.35 |
260417_at | AT1G69770 | chromomethylase 3 | −0.36 | −0.01 | 0.02 | 0.37 | 0.35 |
253953_at | AT4G26750 | hydroxyproline-rich glycoprotein family protein | −0.08 | 0.28 | −0.21 | 0.14 | 0.35 |
259980_at | AT1G76520 | Auxin efflux carrier family protein | −0.24 | 0.12 | −0.26 | 0.09 | 0.35 |
245925_at | AT5G28770 | bZIP transcription factor family protein | −0.31 | 0.04 | −0.13 | 0.23 | 0.35 |
250810_at | AT5G05090 | Homeodomain-like superfamily protein | −0.25 | 0.10 | −0.24 | 0.12 | 0.36 |
247266_at | AT5G64570 | beta-D-xylosidase 4 | −0.36 | −0.01 | −0.27 | 0.08 | 0.36 |
246260_at | AT1G31820 | Amino acid permease family protein | −0.28 | 0.07 | 0.09 | 0.44 | 0.36 |
247327_at | AT5G64120 | Peroxidase superfamily protein | −0.79 | −0.43 | 0.21 | 0.56 | 0.36 |
265478_at | AT2G15890 | maternal effect embryo arrest 14 | −0.56 | −0.21 | −0.42 | −0.06 | 0.36 |
---|---|---|---|---|---|---|---|
253514_at | AT4G31805 | WRKY family transcription factor | −0.01 | 0.34 | −0.41 | −0.06 | 0.36 |
245935_at | AT5G19840 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | −0.09 | 0.27 | −0.18 | 0.18 | 0.36 |
255217_s_at | AT3G30465 | [AT3G30465, transposable element gene]; [AT4G07680, transposable element gene]; [AT2G07395, transposable element gene] | −0.18 | 0.18 | −0.24 | 0.12 | 0.36 |
260970_at | AT1G53640 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 1186 Blast hits to 678 proteins in 89 species: Archae−0; Bacteria−50; Metazoa−731; Fungi−92; Plants−226; Viruses−4; Other Eukaryotes−83 (source: NCBI BLink). | −0.39 | −0.03 | −0.19 | 0.17 | 0.36 |
250911_at | AT5G03730 | Protein kinase superfamily protein | −0.28 | 0.08 | −0.12 | 0.25 | 0.36 |
251084_at | AT5G01520 | RING/U-box superfamily protein | −0.31 | 0.05 | 0.20 | 0.56 | 0.36 |
249862_at | AT5G22920 | CHY-type/CTCHY-type/RING-type Zinc finger protein | −0.21 | 0.15 | −0.37 | −0.01 | 0.36 |
256789_at | AT3G13672 | TRAF-like superfamily protein | −0.37 | −0.01 | 0.08 | 0.44 | 0.36 |
266672_at | AT2G29650 | phosphate transporter 4;1 | −0.52 | −0.15 | 0.00 | 0.37 | 0.36 |
257271_at | AT3G28007 | Nodulin MtN3 family protein | −0.30 | 0.07 | −0.20 | 0.16 | 0.36 |
259364_at | AT1G13260 | related to ABI3/VP1 1 | −0.02 | 0.35 | −0.30 | 0.07 | 0.37 |
250665_at | AT5G06980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | −0.61 | −0.24 | 0.01 | 0.37 | 0.37 |
262121_at | AT1G02800 | cellulase 2 | −0.15 | 0.22 | 0.06 | 0.42 | 0.37 |
266363_at | AT2G41250 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | −0.63 | −0.26 | 0.09 | 0.46 | 0.37 |
259414_at | AT1G02420 | Pentatricopeptide repeat (PPR) superfamily protein | −0.16 | 0.21 | −0.30 | 0.07 | 0.37 |
259490_at | no_match | no_match | −0.30 | 0.07 | −0.11 | 0.26 | 0.37 |
255895_at | AT1G18020 | [AT1G18020, FMN-linked oxidoreductases superfamily protein];[AT1G17990, FMN-linked oxidoreductases superfamily protein] | −0.21 | 0.17 | −0.23 | 0.14 | 0.37 |
254805_at | AT4G12480 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.98 | −0.61 | −0.05 | 0.32 | 0.37 |
263128_at | AT1G78600 | light-regulated zinc finger protein 1 | −0.54 | −0.16 | −0.20 | 0.18 | 0.37 |
253125_at | AT4G36040 | Chaperone DnaJ-domain superfamily protein | −0.13 | 0.24 | −0.01 | 0.36 | 0.37 |
258488_at | AT3G02420 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae−0; Bacteria−0; Metazoa−2; Fungi−2; Plants−60; Viruses−0; Other Eukaryotes−8 (source: NCBI BLink). | −0.23 | 0.15 | −0.20 | 0.18 | 0.37 |
247713_at | AT5G59330 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.03 | 0.34 | −0.36 | 0.01 | 0.37 |
261753_at | AT1G76340 | golgi nucleotide sugar transporter 3 | −0.35 | 0.02 | −0.22 | 0.15 | 0.37 |
---|---|---|---|---|---|---|---|
263560_s_at | AT2G15350 | [AT2G15350, fucosyltransferase 10]; [AT2G15370, fucosyltransferase 5] | −0.12 | 0.26 | −0.30 | 0.07 | 0.37 |
260640_at | AT1G53350 | Disease resistance protein (CC-NBS-LRR class) family | −0.13 | 0.24 | −0.36 | 0.01 | 0.37 |
259686_at | AT1G63100 | GRAS family transcription factor | −0.12 | 0.25 | −0.39 | −0.02 | 0.38 |
246932_at | AT5G25190 | Integrase-type DNA-binding superfamily protein | −0.36 | 0.02 | −0.34 | 0.04 | 0.38 |
264261_at | AT1G09240 | nicotianamine synthase 3 | −0.18 | 0.19 | −0.22 | 0.16 | 0.38 |
249748_at | AT5G24620 | Pathogenesis-related thaumatin superfamily protein | −0.06 | 0.32 | −0.19 | 0.19 | 0.38 |
254169_at | AT4G24290 | MAC/Perforin domain-containing protein | −0.22 | 0.16 | −0.27 | 0.11 | 0.38 |
247887_at | AT5G57880 | multipolar spindle 1 | −0.23 | 0.15 | 0.00 | 0.38 | 0.38 |
267364_at | AT2G40080 | Protein of unknown function (DUF1313) | −0.01 | 0.37 | −0.26 | 0.12 | 0.38 |
255627_at | AT4G00955 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae−0; Bacteria−0; Metazoa−10; Fungi−0; Plants−84; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.25 | 0.13 | −0.44 | −0.06 | 0.38 |
261492_at | AT1G14290 | sphingoid base hydroxylase 2 | −0.33 | 0.05 | −0.06 | 0.32 | 0.38 |
252072_at | AT3G51710 | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain | −0.07 | 0.31 | −0.06 | 0.32 | 0.38 |
257199_at | AT3G23710 | Tic22-like family protein | −0.27 | 0.11 | −0.17 | 0.21 | 0.38 |
259661_at | AT1G55265 | Protein of unknown function, DUF538 | −0.29 | 0.09 | −0.50 | −0.12 | 0.38 |
256025_at | AT1G58370 | glycosyl hydrolase family 10 protein/carbohydrate-binding domain-containing protein | −0.30 | 0.08 | 0.10 | 0.49 | 0.38 |
257191_at | AT3G13175 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−29; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.13 | 0.26 | −0.32 | 0.06 | 0.38 |
266867_at | AT2G45770 | signal recognition particle receptor protein, chloroplast (FTSY) | −0.28 | 0.10 | −0.32 | 0.07 | 0.38 |
249769_at | AT5G24120 | sigma factor E | −0.50 | −0.12 | 0.14 | 0.53 | 0.39 |
252100_at | AT3G51110 | Tetratricopeptide repeat (TPR)-like superfamily protein | −0.09 | 0.30 | −0.18 | 0.21 | 0.39 |
252663_at | AT3G44070 | Glycosyl hydrolase family 35 protein | −0.19 | 0.20 | −0.21 | 0.18 | 0.39 |
251869_at | AT3G54500 | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae−0; Bacteria−4; Metazoa−38; Fungi−11; Plants−120; Viruses−0; Other Eukaryotes−10 (source: NCBI BLink). | −0.38 | 0.01 | 0.16 | 0.55 | 0.39 |
266385_at | AT2G14610 | Pathogenesis-related gene 1 | −0.36 | 0.03 | −0.25 | 0.14 | 0.39 |
260037_at | AT1G68840 | related to ABI3/VP1 2 | −0.50 | −0.11 | −0.30 | 0.10 | 0.39 |
245337_at | AT4G16566 | histidine triad nucleotide-binding 4 | −0.36 | 0.03 | −0.24 | 0.16 | 0.39 |
261248_at | AT1G20030 | Pathogenesis-related thaumatin superfamily protein | −0.37 | 0.03 | −0.10 | 0.29 | 0.40 |
---|---|---|---|---|---|---|---|
264377_at | AT2G25060 | early nodulin-like protein 14 | −0.25 | 0.15 | −0.08 | 0.32 | 0.40 |
248482_at | no_match | no_match | −0.11 | 0.29 | −0.18 | 0.22 | 0.40 |
262399_at | AT1G49500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−24; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.65 | −0.25 | 0.00 | 0.41 | 0.41 |
256527_at | AT1G66100 | Plant thionin | −0.95 | −0.55 | 0.14 | 0.55 | 0.41 |
257330_at | ATMG01290 | hypothetical protein | 0.09 | 0.49 | −0.01 | 0.39 | 0.41 |
247939_at | AT5G57160 | DNA ligase IV | −0.03 | 0.37 | −0.37 | 0.04 | 0.41 |
258419_at | AT3G16670 | Pollen Ole e 1 allergen and extensin family protein | −0.42 | −0.01 | −0.83 | −0.41 | 0.41 |
256266_at | AT3G12320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins in 16 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−98; Viruses−0; Other Eukaryotes−4 (source: NCBI BLink). | −0.52 | −0.10 | 0.23 | 0.65 | 0.41 |
248337_at | AT5G52310 | low-temperature-responsive protein 78 (LTI78)/desiccation-responsive protein 29A (RD29A) | −0.48 | −0.06 | −0.76 | −0.34 | 0.41 |
245734_at | AT1G73480 | alpha/beta-Hydrolases superfamily protein | −0.47 | −0.05 | 0.23 | 0.65 | 0.41 |
245749_at | AT1G51090 | Heavy metal transport/detoxification superfamily protein | −0.23 | 0.19 | −0.48 | −0.07 | 0.42 |
267568_at | AT2G30780 | Tetratricopeptide repeat (TPR)-like superfamily protein | −0.39 | 0.03 | −0.20 | 0.21 | 0.42 |
250971_at | AT5G02810 | pseudo-response regulator 7 | −0.24 | 0.18 | −0.08 | 0.34 | 0.42 |
259925_at | AT1G75040 | pathogenesis-related gene 5 | −0.39 | 0.03 | −0.48 | −0.06 | 0.42 |
245769_at | AT1G30220 | inositol transporter 2 | −0.20 | 0.22 | −0.08 | 0.35 | 0.42 |
266572_at | AT2G23840 | HNH endonuclease | −0.41 | 0.02 | 0.07 | 0.50 | 0.43 |
256269_at | AT3G12250 | TGACG motif-binding factor 6 | −0.11 | 0.31 | −0.15 | 0.27 | 0.43 |
248756_at | AT5G47560 | tonoplast dicarboxylate transporter | −0.30 | 0.13 | −0.14 | 0.29 | 0.43 |
261423_at | AT1G18750 | AGAMOUS-like 65 | −0.15 | 0.29 | −0.07 | 0.38 | 0.44 |
254770_at | AT4G13340 | Leucine-rich repeat (LRR) family protein | −0.25 | 0.20 | −0.36 | 0.10 | 0.45 |
248620_at | AT5G49320 | Protein of unknown function (DUF1218) | −0.25 | 0.21 | −0.14 | 0.31 | 0.46 |
246043_at | AT5G19380 | CRT (chloroquine-resistance transporter)-like transporter 1 | −0.07 | 0.39 | −0.13 | 0.32 | 0.46 |
261026_at | AT1G01240 | unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae−0; Bacteria−2; Metazoa−11; Fungi−0; Plants−80; Viruses−0; Other Eukaryotes−2 (source: NCBI BLink). | −0.46 | 0.00 | 0.03 | 0.49 | 0.46 |
253061_at | AT4G37610 | BTB and TAZ domain protein 5 | −0.51 | −0.05 | −0.60 | −0.14 | 0.46 |
248910_at | AT5G45820 | CBL-interacting protein kinase 20 | −0.65 | −0.19 | 0.15 | 0.62 | 0.46 |
258225_at | AT3G15630 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−61; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.52 | −0.06 | −0.41 | 0.05 | 0.46 |
---|---|---|---|---|---|---|---|
251036_at | AT5G02160 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−121; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.63 | −0.16 | −0.31 | 0.15 | 0.47 |
247524_at | AT5G61440 | atypical CYS HIS rich thioredoxin 5 | −0.16 | 0.31 | −0.53 | −0.06 | 0.47 |
263836_at | AT2G40330 | PYR1-like 6 | −0.39 | 0.08 | −0.33 | 0.14 | 0.47 |
266656_at | AT2G25900 | Zinc finger C-x8-C-x5-C-x3-H type family protein | −0.66 | −0.18 | −0.33 | 0.15 | 0.47 |
262224_at | AT1G74900 | Pentatricopeptide repeat (PPR) superfamily protein | −0.23 | 0.24 | −0.26 | 0.21 | 0.48 |
263443_at | AT2G28630 | 3-ketoacyl-CoA synthase 12 | −0.34 | 0.13 | −0.28 | 0.20 | 0.48 |
245001_at | ATCG00220 | photosystem II reaction center protein M | −0.43 | 0.05 | −0.05 | 0.42 | 0.48 |
258402_at | AT3G15450 | Aluminium induced protein with YGL and LRDR motifs | −0.83 | −0.34 | −0.22 | 0.26 | 0.48 |
253660_at | AT4G30140 | GDSL-like Lipase/Acylhydrolase superfamily protein | −0.13 | 0.36 | −0.13 | 0.36 | 0.48 |
261845_at | AT1G15960 | NRAMP metal ion transporter 6 | −0.42 | 0.06 | 0.10 | 0.59 | 0.49 |
259751_at | AT1G71030 | MYB-like 2 | −0.64 | −0.15 | −0.15 | 0.34 | 0.49 |
ID | Locus | Description | Treatment Effects | FR effect ratio 26˚C/ 22˚C | |||
---|---|---|---|---|---|---|---|
<1> W+FR effect (22˚C) | <2> W+FR effect (26˚C) | <3> 26˚C effect (WL) | <4> 26˚C effect (W+FR) | ||||
262986_at | AT1G23390 | Kelch repeat-containing F-box family protein | −0.84 | −0.34 | −0.21 | 0.29 | 0.50 |
247478_at | AT5G62360 | Plant invertase/pectin methylesterase inhibitor superfamily protein | −1.02 | −0.52 | −0.51 | −0.01 | 0.50 |
257365_x_at | AT2G26020 | plant defensin 1.2b | −0.66 | −0.16 | −0.51 | 0.00 | 0.51 |
265117_at | AT1G62500 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −0.36 | 0.15 | −0.41 | 0.10 | 0.51 |
246815_at | AT5G27220 | Frigida-like protein | −0.38 | 0.13 | −0.27 | 0.25 | 0.51 |
255822_at | AT2G40610 | expansin A8 | −0.01 | 0.51 | −0.13 | 0.39 | 0.51 |
245264_at | AT4G17245 | RING/U-box superfamily protein | −0.44 | 0.08 | −0.29 | 0.23 | 0.51 |
259058_at | AT3G03470 | cytochrome P450, family 87, subfamily A, polypeptide 9 | −0.09 | 0.43 | 0.27 | 0.79 | 0.52 |
258901_at | AT3G05640 | Protein phosphatase 2C family protein | −0.36 | 0.17 | −0.06 | 0.47 | 0.53 |
258338_at | AT3G16150 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | −0.11 | 0.42 | 0.02 | 0.55 | 0.53 |
253161_at | AT4G35770 | Rhodanese/Cell cycle control phosphatase superfamily protein | −0.77 | −0.23 | 0.58 | 1.12 | 0.54 |
262259_s_at | AT1G53890 | [AT1G53890, Protein of unknown function (DUF567)]; [AT1G53870, Protein of unknown function (DUF567)] | −0.62 | −0.07 | −0.50 | 0.06 | 0.55 |
---|---|---|---|---|---|---|---|
265481_at | AT2G15960 | unknown protein; Has 14 Blast hits to 14 proteins in 5 species: Archae−0; Bacteria−0; Metazoa−0; Fungi−0; Plants−14; Viruses−0; Other Eukaryotes−0 (source: NCBI BLink). | −0.59 | −0.03 | 0.23 | 0.78 | 0.55 |
264339_at | AT1G70290 | trehalose-6-phosphatase synthase S8 | −0.50 | 0.06 | 0.22 | 0.78 | 0.56 |
260287_at | AT1G80440 | Galactose oxidase/kelch repeat superfamily protein | −0.54 | 0.02 | 0.00 | 0.56 | 0.56 |
260556_at | AT2G43620 | Chitinase family protein | −1.01 | −0.44 | 0.02 | 0.59 | 0.58 |
265511_at | AT2G05540 | Glycine-rich protein family | −0.48 | 0.11 | 0.10 | 0.68 | 0.58 |
267461_at | AT2G33830 | Dormancy/auxin associated family protein | −1.38 | −0.79 | −0.85 | −0.25 | 0.59 |
261937_at | AT1G22570 | Major facilitator superfamily protein | −0.73 | −0.07 | −0.52 | 0.14 | 0.66 |
257206_at | AT3G16530 | Legume lectin family protein | −0.88 | −0.21 | −0.70 | −0.03 | 0.67 |
262113_at | AT1G02820 | Late embryogenesis abundant 3 (LEA3) family protein | −1.09 | −0.37 | −0.08 | 0.65 | 0.72 |
248622_at | AT5G49360 | beta-xylosidase 1 (BXL1) | −0.65 | 0.17 | −0.06 | 0.76 | 0.83 |
247474_at | AT5G62280 | Protein of unknown function (DUF1442) | 0.80 | 1.66 | −0.30 | 0.55 | 0.86 |
254574_at | AT4G19430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae−12; Bacteria−1396; Metazoa−17338; Fungi−3422; Plants−5037; Viruses−0; Other Eukaryotes−2996 (source: NCBI BLink). | 0.75 | 1.68 | 1.48 | 2.42 | 0.93 |
265111_at | AT1G62510 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | −1.07 | −0.10 | 1.31 | 2.28 | 0.97 |