Open Journal of Genetics, 2012, 2, 155-162 OJGen http://dx.doi.org/10.4236/ojgen.2012.23020 Published Online September 2012 (http://www.SciRP.org/journal/ojgen/) Further evidence for the theory that crossover interference in Drosophila melanogaster is dependent on genetic rather than physical distance between adjacent crossover points Petter Portin Laboratory of Genetics, Department of Biology, University of Turku, Turku, Finland Email: petter.portin@utu.fi Received 19 May 2012; revised 28 June 2012; accepted 10 July 2012 ABSTRACT Effect of heat shock on certain meiotic parameters in Drosophila melanogaster was studied in the cv-v-f re- gion of the X chromosome of females homozygous for mus309 mutation, deficient in DNA double-strand break repair, or being of wild type. The heat shock in the wild females caused that the frequencies of the single crossovers and all the map lengths decreased while the frequency of the double crossovers and crossover interference remained unchanged. In the mus309 mutants all parameters remained unchanged except that single crossovers in the cv-v interval were less frequent, and that crossover interference dimin- ished. Thus, heat shock seems have two separate ef- fects; one being independent on the mus309 gene and affecting the occurrence of crossing over itself, and the other being dependent on the mus309 gene and affecting some precondition of crossing over. This precondition is probably the choice between two routes of the repair of double-strand DNA breaks known to be controlled by the mus309 gene. The re- sults are in accordance with the genetic models of interference in which interference depends on genetic distance between the crossover points, but in contra- diction with physical models where interference is dependent on physical distance between the crossover points. Keywords: Chiasma; Chromosome; Map Length; Meiosis 1. INTRODUCTION 1.1. General Introduction Meiotic crossing over, the exchange of genetic material between homologous chromosomes during the genera- tion of gametes in animals and sexual spores in plants and fungi leads to recombination of genes and formation of chiasmata. A chiasma is a sufficient condition for the segregation of homologous chromosomes, which leads to the reduction of the chromosome number from diploid to haploid. An important phenomenon, which has recently gar- nered much attention, associated with crossing over is crossover interference, i.e. the fact that multiple cross- overs in each pair of homologous chromosomes are less frequent than would be expected on the basis of random coincidence of single crossovers [1-3]. The phenomenon of crossover interference is very likely responsible for the occurrence of so called obligate crossovers, and thus for the formation of obligate chiasmata. The term “obligate crossover” refers to the fact that, in most species, it is rare to find chromosomes that do not undergo crossing over. For example, in Drosophila, there is usually one chiasma per chromosome arm. The feature of the obligate chiasma is biologically sensible because it ensures the disjunction of homologous chromosomes. 1.2. Models of Crossover Interference and the Purpose of the Present Study In principle, there are two different categories of models of crossover interference. The first of these categories of models are called genetic models which assume that in- terference depends on the genetic (i.e. linkage map) dis- tance, measured in Morgans, between adjacent crossovers [4]. To my knowledge, currently only one model, called the “counting model”, falls into this category [4,5]. The second category of models, called physical mod- els, hypothesize that crossover interference is dependent on the physical distance (microns or base pairs) between the adjacent crossovers. In general, these models, which are many, suggest that some kind of physical signal trav - els along the bivalent and determines the distribution of crossovers. Recently I presented evidence for the genetic models of crossover interference in Drosophila melanogaster [6]. OPEN ACCESS
P. Portin / Open Journal of Genetics 2 (2012) 155-162 156 The aim of the present study was to get further evidence for the theory that crossover interference is dependent on genetic rather than physical distances between adjacent crossover points. Crossing-over frequencies, crossover interference, recombination frequencies and map dis- tances were compared in the cv-v-f region of the X chromosome of D. melanogaster in females bearing ei- ther wild type 3rd chromosomes (control) or having the DNA double-strand break repair deficient mus309D2/ mus309D3 mutant constitution in the 3rd chromosomes (experiment), an d given a h eat shock of 24 hr in 35˚C, o r being without a heat shock. It was observed that the heat shock in the wild control females caused that the frequencies of the single cross- overs and all the map lengths decreased while the fre- quency of the double crossovers and crossover interfer- ence remained unchanged. In contrast to this, in the ex- perimental mus309 mutant females all other meiotic pa- rameters studied remained unchanged except that the frequency of the single crossovers in the cv-v interval decreased, and that crossover interference diminished. Thus, it appears that the heat shock has two separate ef- fects; one being independent on the mus309 gene and affecting the occurrence of crossing over itself, and the other being dependent on the mus309 gene and affecting some precondition of crossing over. It is suggested that this precondition of crossing over is the choice between two routes of the repair of double-strand DNA breaks known to be controlled by the mus309 gene. It should also be noted that the effect of the heat shock in the mu- tant females was generally speaking the opposition of its effect in the wild type females. These results are in ac- cordance with the genetic models, particularly the coun- ting number model, of interference in which interference depends on genetic distance between the adjacent cross- over points, but the result is in contradiction with any physical model of interference where interference is de- pendent on physical distance between the adjacent crossover points. 1.3. The mus309 Gene and Molecular Models of Crossing Over Molecular models of meiotic crossing over suggest that crossing over is initiated by the formation of meio- sis-specific double-strand breaks (DSBs) of DNA, cata- lyzed eventually in all eukaryotes by the topoisomerase- like Spo11 protein, encoded in Drosophila by the mei- W68 gene [7], in co-operation with other enzymes. The birth of DSBs is followed by formation of heteroduplex DNA and rejoining of the ends created in the breakage involving a single-end-invasion intermediate. Following this, a physical structure called the displacement loop will be formed. Subsequent DNA synthesis and second end capture form a structure known as the double Holliday junction (dHJ), which is then resolved to form either crosso vers or non-crossovers [8,9]. Two alternative pathways for the repair of the DSBs are known: the synthesis-dependent strand annealing (SDSA) pathway and the double-strand-break repair (DSBR) pathway. The former pathway leads exclusively to non-crossover products and the latter to both crossover and non-crossover products [10,11]. In D. melanogaster, the mus309 gene located on the right arm of chromosome three (86F4) encodes, in a manner similar to its orthologues in other organisms, a RecQ helicase [12-15] and, accordingly, is involved in DSB repair [10,11,16]. In particular, it is known that the product of the mus309 gene is involved in the SDSA pathway of the repair of the DSBs [17,18]. More spe- cifically, in the mus309 mutants the SDSA pathway is blocked, while the DSBR pathway remains functional [19]. Thus, the mus309 gene seems to control the choice made by the oocyte between the two alternative path- ways of DSB repair. The same is also true for the Sgs1 gene, the mus309 orthologue of yeast [20]. Consequently, if in mus309 mutants more DSBs are repaired as cross- overs by the DSBR pathway, a change in the crossover/ non-crossover ratio can be expected, since fewer non- crossovers are produced. 2. MATERIAL AND METHODS 2.1. Experimental Procedures Crossing over frequency and interference in the X chro- mosome in the regions between the crossveinless (cv, 1 - 13.7), vermilion (v, 1 - 33.0) and forked (f, 1 - 56.7) markers in four different experimental procedures were studied. In each procedure, six daily broods of progeny were derived after a certain treatment of virgin females before they were mated with males. The progeny was collected as daily broods in order to get the best yield of progeny flies. In the analysis of the results, however, the materials of the broods were pooled. The females were isolated and the treatment started not later than twelve hours after their hatching from the pupa. In the control crosses, cv v f/+ + +; +/+ females were crossed with cv v f / Y males, and in the experimental crosses, cv v f/+ + + ; mus309D2/mus309D3 females were crossed with cv v f/Y males. The experimental females were derived from the following preliminary cross: cv v f; mus309D3/TM6, Tb females crossed with + + +/Y; mus309D2/TM6, Tb males (Tb; Tubby 3 - 90.6) and identified on the basis of their non-Tubby pheno type. The treat ments in bo th the contr ol crosses and in the experimental crosses were as follows: The virgin females were either given a heat shock of 24 hours in 35˚C 0.5˚C or they were kept in 25˚C 1˚C for 24 hours. Copyright © 2012 SciRes. OPEN ACCESS
P. Portin / Open Journal of Genetics 2 (2012) 155-162 157 Both the mus309 alleles used carry mutational chan ges that could potentially impair or abolish at least the heli- case function of the MUS309 protein. In mus309D2, there is a stop codon between the sequence motifs encoding the third and fourth helicase motif of the protein. mus309D3, for its part, has a glutamic acid to lysine sub- stitution in the conserve d helicase II motif, in addition to another amino acid substitution close to the C terminus [21]. It has been demonstrated that the genotype mus- 309D2/mus309D3 is semi-sterile (Janos Szabad, personal communication; see also [21-23]). Because of the semi-sterility of the females, the mu- tant-female crosses were carried out in cultures in which three females were mated with 3 - 5 males, whereas the control crosses were single-female cultures. The same number (30) of crosses was made in both the control and the mutant-female series. After the initial mating, the parental flies were transferred without etherisation into fresh culture bottles ev ery 24th hour for five consecu tive days, and discarded after the six th day of egg laying. The progeny, thus consisting of six daily broods in both the experimental and control procedure, were raised in 25˚C on a standard Drosophila medium consisting of semolina, syrup, agar-agar and both dried and fresh yeast. 2.2. Calculation of the Frequency of the True Single Crossovers Some of the observed single crossovers in the cv-v and v-f intervals actually result from meioses that have two exchanges, one in each interval. Assuming no chromatid interference, the three classes of double-exchange tetrads, 2-, 3- and 4-strand doubles, occur in a 1:2:1 ratio [24]. Therefore, the true frequency of single crossovers, i.e. the number of single crossovers that resulted from meio- ses with only one ex change in the cv-v-f region, was cal- culated by subtracting the observed frequency of double crossovers from those of each of the single crossover classes. 2.3. Measurement of Interference The coefficient of coincidence, C, was calculated ac- cording to the following formula of Stevens [25], which is a maximum likelihood equation ˆ, wn cwxwy where w is the number of flies which were double cross- overs, x and y are the numbers of flies which were single crossovers for cv and v, and v and f, respectively, and n is the total number of flies. The variance of C was calculated according to the fol- lowing formula, also given by Stevens [25] 2 12 ˆ, ccacbcabcab Vc nab where a and b are the recombination frequencies of cv and v, and v an d f, respectively. This is also a maximum likelihood eq uation. 2.4. Statistical Methods In the calculations of the variance of the coefficient of coincidence, the formula of Stevens [25] given above was used. Otherwise, the variance of binomial frequen- cies, such as recombination frequencies, was calculated according to the usual formula: s2 = pq/n, where n is the total number of flies, p is the recombination frequency, and q is 1 – p. The standard deviation (S.D.) of all the binomial frequencies the coefficient of coincidence in- cluded is the square root of their variances. In the analysis of the significance of difference of the coefficients of coincidence and other binomial frequen- cies the two-tailed binomial t-test was employed. 3. RESULTS The distribution of the progeny into differ ent phenotypic classes in the control crosses is given in Table 1, and in the experimental crosses in Table 2. The effect of the heat shock on the phenomenon of crossing over including crossover interference in the control cross females is given in Table 3. It appears that all the parameters studied except the frequency of double crossovers and the coefficient of coincidence changed due to the heat shock treatment. The frequencies of true single crossovers decreased in both intervals studied. The recombination frequencies, directly giving the genetic map distances between the markers involved , firstly of cv and v markers and secondly of v and f markers decreased, and so did—of course—also the map distance of the cv and f markers. The respective figures derived from the experimental crosses are given in Table 4. The measurement of the parameters studied resulted in almost complete opposi- tion of the parameters in the control crosses: All the pa- rameters remained unaltered except that the frequency of true single crossovers in the cv-v interval decreased and the coefficient of coincidence increased, i.e. crossover interference diminished. It should be noted that despite the fact that interference diminished, the frequency of double crossovers did not change at all. This must mean that the distribution of single crossovers changed be- coming denser due to the heat shock treatment. Comparison of the meiotic parameters between the genotypes studied in not-heat-shocked and in heat shocked females are given in Tables 5 and 6 respectively. As can be seen from the tables, all parameters except Copyright © 2012 SciRes. OPEN ACCESS
P. Portin / Open Journal of Genetics 2 (2012) 155-162 Copyright © 2012 SciRes. 158 OPEN ACCESS Table 1. Results of the control crosses. Distribution of progeny from the crosses in which cv v f/+ + +; +/+ females without or after a heat shock of 24 hr in 35˚C were crossed with cv v f/Y; +/+ males. Number of progeny Phenotype of the progeny + + + cv v f cv + + + v f cv v + + + f cv + f + v + Total number of flies No heat shock 4690 4311 1197 1243 1499 1577 147 179 14,843 Heat shocked 2428 2383 566 570 700 753 70 67 7537 Table 2. Results of the experimental crosses. Distribution of progeny from the crosses in which cv v f/+ + +; mus309D2/mus309D3 females without or after a heat shock of 24 hr in 35˚C were crossed with cv v f/Y; +/+ males. Number of progeny Phenotype of the progeny + + + cv v f cv + + + v f cv v + + + f cv + f + v + Tota l n umber of flies No heat shock 2545 2035 601 868 589 839 104 180 7761 Heat shocked 1661 1311 373 552 386 577 76 116 5054 Table 3. Effect of heat shock on crossing over in females being of wild type regarding the mus309 locus. Parameters measured from the results of the crosses in which cv v f/+ + +; +/+ females without or after a heat shock of 24 hr in 35˚C were crossed with cv v f/ Y; +/+ males. Parameter No heat shock Heat shocked Significance of the differ ence Total number of flies % ± S.D. 14,843 7532 Frequency of true single crossovers in the cv-v interval % ± S.D. 14.24 ± 0.29 13.25 ± 0.39 t = 2.04; P = 0.04 Frequency of true single crossovers in the v-f interval % ± S.D. 18.53 ± 0.32 17.46 ± 0.44 t = 1.96; P = 0.05 Frequency of double cro ssov ers % ± S.D. 2.20 ± 0.12 1.82 ± 0.15 t = 1.89; P = 0.06 Recombination frequency of the cv and v markers % ± S.D. 18.64 ± 0.32 16.89 ± 0.43 t = 3.22; P = 0.0013 Recombination frequency of the v and f markers % ± S.D. 22.92 ± 0.34 21.10 ± 0.47 t = 3.09; P = 0.0020 Map distance of the cv and f markers cM ± S.D. 41.55 ± 0.40 37.99 ± 0.56 t = 5.13; P = 0.0020 Coefficient of coincidence C ± S.D. 0.5142 ± 0.0253 0.5101 ± 0.0314 t = 0.58; P = 0.56 Table 4. Effect of heat shock on crossing over in mus309 mutant females. Parameters measured from the results of the crosses in which cv v f/+ + +; mus309D2/mus309D3 females without or after a heat shock of 24 hr in 35˚C were crossed with cv v f/Y; +/+ males. Parameter No heat shock Heat shocked Significance of the differ ence Total number of flies % ± S.D. 7761 505 4 Frequency of true single crossovers in the cv-v interval % ± S.D. 15.27 ± 0.41 14.54 ± 0.50 t = 3.69 P = 0.0002 Frequency of true single crossovers in the v-f interval % ± S.D. 14.74 ± 0.40 15.26 ± 0.51 t = 1.40 P = 0.16 Frequency of double cro ssov ers % ± S.D. 3.66 ± 0.21 3.80 ± 0.27 t = 0.41 P = 0.68 Recombination frequency of the cv and v markers % ± S.D. 22.59 ± 0.47 22.14 ± 0.58 t = 0.60 P = 0.55 Recombination frequency of the v and f markers % ± S.D. 22.06 ± 0.47 22.85 ± 0.59 t = 1.05 P = 0.29 Map distance of the cv and f markers cM ± S.D. 44.65 ± 0.56 44.99 ± 0.49 t = 0.38 P = 0.70 Coefficient of coincidence C ± S.D. 0.7344 ± 0.0318 0.7508 ± 0.0447 t = 2. 0 7 P = 0.039
P. Portin / Open Journal of Genetics 2 (2012) 155-162 159 Table 5. Effect of the mus309 genotype on crossing over in females not given a heat shock. Comparison of parameters measured from the results of the crosses in which cv v f/+ + +; +/+ (control) and cv v f/+ + +; mus309D2/mus309D3 (experimental) females not given a heat shock were crossed with cv v f/Y; +/+ mal es. Parameter Control Experiment Significance of the difference Total number of flies % ± S.D. 14,843 7761 Frequency of true single crossovers in the cv-v interval % ± S.D. 15.27 ± 0.41 14.54 ± 0.50 t = 2.06 P = 0.0394 Frequency of true single crossovers in the v-f interval % ± S.D. 14.74 ± 0.40 15.26 ± 0.51 t = 7.10 P < 0.0001 Frequency of double crossovers % ± S.D. 3.66 ± 0.21 3.80 ± 0.27 t = 6.34 P < 0.0001 Recombination frequency of the cv and v markers % ± S.D. 22.59 ± 0.47 22.14 ± 0.58 t = 6.98 P < 0.0001 Recombination frequency of the v and f markers % ± S.D. 22.06 ± 0.47 22.85 ± 0.59 t = 1.45 P = 0.1471 Map distance of the cv and f markers cM ± S.D. 44.65 ± 0.56 44.99 ± 0.49 t = 4.43 P < 0.0001 Coefficient of coincidence C ± S.D. 0.7344 ± 0.0318 0.7508 ± 0.0447 t = 31.78 P < 0.0001 Table 6. Effect of the mus309 genotype on crossing over in heat shocked females. Comparison of parameters measured from the results of the crosses in which cv v f/+ + +; + / + (control) and cv v f/+ + +; mus309D2/mus309D3 (experimental) females which had received a heat shock of 35˚C, 24 h were crossed with cv v f/Y; +/+ male s. Parameter Control Experiment Significance of the difference Total number of flies % ± S.D. 7532 5054 Frequency of true single crossovers in the cv-v interval % ± S.D. 13.25 ± 0.39 14.54 ± 0.50 t = 2.06 P = 0.0394 Frequency of true single crossovers in the v-f interval % ± S.D. 17.46 ± 0.44 15.26 ± 0.51 t = 3.26 P = 0.0011 Frequency of double crossovers % ± S.D. 1.82 ± 0.15 3.80 ± 0.27 t = 6.13 P < 0.0001 Recombination frequency of the cv and v markers % ± S.D. 16.89 ± 0.43 22.14 ± 0.58 t = 7.37 P < 0.0001 Recombination frequency of the v and f markers % ± S.D. 21.10 ± 0.47 22.85 ± 0.59 t = 2.33 P = 0.0198 Map distance of the cv and f markers cM ± S.D. 37.99 ± 0.56 44.99 ± 0.49 t = 7.84 P < 0.0001 Coefficient of coincidence C ± S.D. 0.5101 ± 0.0314 0.7508 ± 0.0447 t = 27.08 P < 0.0001 the frequency of recombination of v and f markers in the not-heat-shocked females were different in both sets of data. It should specifically be observed that in both series the frequency of double crossovers and the coefficient of coincidence were higher in the mus309 mutant females than in the wild type females. These data ind icate that in both series the density of crossovers increased due to the effect of the mus309 mutation. 4. DISCUSSION 4.1. The mus309 Gene Controls the Choice Made by the Oocyte of the Route of Double Holliday Junction Repair The first six broods after the initiation of egg laying of virgin females, i.e. the broods constituting the material of this study represent oocytes which, for the most part at least, were in the prophase stage of m e i osi s during the heat shock treatment, and had mainly passed the stage of DNA replication during the premeiotic interphase [26-29]. DSB formation occurs only during the earlier stages of meiotic prophase and initiates at a specific time after premeiotic DNA replication [29]. Crossing over in D. melanogaster for its part is known to occur duri ng t he pach y tene stage of the meiotic prophase [29,30], and the progenies in the 3rd brood represent this stage of meiosis [28] . It is convincingly established that those meiotic mu- tants of D. melanogaster affecting crossing over which also affect interference involve preconditions of cr ossing over, whereas those mutants that affect crossing over without affecting interference involve the crossing over event itself [31]. Consequently, the genes involved are called precondition genes and exchange genes, respec- tively. This was theoretically shown by Sandler et al. [32] as follows: Let a be the probability of the fulfillment of Copyright © 2012 SciRes. OPEN ACCESS
P. Portin / Open Journal of Genetics 2 (2012) 155-162 160 preconditions of crossing over in one region and only in that region in a three-point crossing-over experiment. Let b be th e probability of fulfillmen t of the same in another region and only in that region. Let d be the probability of the fulfillment of the preconditions in both region s at the same time, and x the probability of exchange, given the preconditions. From this it follows that the coefficient of coincidence, C, is 2 dxd C adxbd adbd Since C is independent of x, if a mutant that acts on crossing over also affects interference, it must influence the preconditions of crossing over. If, however, interfer- ence remains unaltered, the target of the effect is the ex- change itself. What in this respect is true for meiotic mutants is, of course, also true for other factors that affect crossing over, such as the heat shock treatment in the present study. Heat shock in the control females affected the crossing over frequencies but interference remained unaltered (Table 3). Thus, taking the foregoing into acco unt, it can without doubt be concluded that heat shock in the control females affected the event of crossing over itself. In contrast to this, heat shock in the experimental fe- males affected both the crossing over frequencies and interference (Table 4). Thus, heat shock in the presence of the mus309 mutation affected some precondition of crossing over, and therefore mus309 belongs to the class of mutations that Baker and Carpenter [33] referred to as the “precondition mutants”, meaning that they act prior to the time when crossovers are actually generated. This conclusion is strongly supported by the fact that inter- ference decreased in the experimental mus309 mutant females as compared to the control females in both the non-heat-shock-treated and heat shocked females (Ta- bles 5 and 6). Thus, it appears that the heat shock has two separate effects; one being independent on the mus309 gene and affecting the occurrence of crossing over itself, and the other being dependent on the mus309 gene and affecting some precondition of crossing over. As indicated in the introduction, the precondition of crossing over, which the mus309 gene product affects, is the repair of DSBs—a necessary condition for crossing over. In particular, it is known that the MUS309 protein is involved in the SDSA pathway of the repair of the DSBs. Specifically, it is also known that in the mus309 mutants the SDSA pathway is blocked, while the DSBR pathway remains functional [19]. As also indicated in th e intro duction , of these p athways the SDSA pathway leads exclusively to non-crossover end products of the repairing process while the DSBR pathway leads to both non-crossover and crossover end products. Therefore, in the mus309 mu tant female s mor e DSBs are expected to be repaired as crossovers than in the wild type females. In other words, map lengths should be increased in the mus309 mutants as compared to the wild type females. This is precisely what was ob- served in the present study (Tables 5 and 6). Moreover, it should also be noted that, as indicated in the results, the data show that in both the non-heat-shock-treated and the heat shocked females the density of crossovers in- creased due to the effect of the mus309 mutation. The same result was obtained in the mus309 mutant females where the distribution of single crossovers became denser due to the effect of the heat shock. These two results show that in the mus309 mutant females more DSBs than in the wild type females are repaired as crossovers instead of non-crossovers. Consequently, it is suggested that actually the precon- dition of crossing over which the mus309 gene affects seems to be the choice between the two routes of the DSB, or more precisely double Holliday junction, repair. 4.2. Testing the Models of Crossover Interference This part of the discussion is mutatis mutandis similar with the respective discussion of an analogous series of experiments conducted by the present author where the effect of temperature on crossing over and crossover interference in mus309 mutants of D. melanogaster was investigated [6]. The results of these two studies recip- rocally support each others. As mentioned in the introduction, models of crossover interference can, in principle, be divided into two differ- ent categories. The first category of models, called ge- netic models [4], assumes that interference is dependent on genetic (i.e. linkage map) distance (Morgans) between adjacent crossovers. To my knowledge, currently only one model, called the “counting model”, [4,5] falls into this category. The central feature of the counting model is that re- combinational intermediates (C’s) have two fates—they can be resolved with crossing over (Cx) or without (Co). The C’s are distributed at random with respect to each other, and interference results from constraints on the resolution of C’s. The basic constraint is that each pair of neighboring Cx’s must have a certain number, m, of Co’s between them, as if the meiocyte was able to “count” recombination events. The second category of models, which may be called physical models, hypothesizes that crossover interference is dependent on physical distance (microns or base pairs) between the adjacent crossovers. In general, these mod- els suggest that some kind of physical signal travels Copyright © 2012 SciRes. OPEN ACCESS
P. Portin / Open Journal of Genetics 2 (2012) 155-162 161 along the bivalent and determines the distribution of crossovers. One of the models belonging to this category, the reaction-diffusion model [34], is quantitative while the other models are qualitative. According to the reaction-diffusion model, a “random walking” precursor becomes immobilized and matures into a crossover point. The interference is caused by a pair-annihilation of the random walkers, called the A particles, due to their collision together, or by annihila- tion of a random walker due to its collision with an im- mobilized point. This model has two parameters—the initial density of the random walkers, α, and the rate, h, of their processing into crossover points. It is logical to conclude that interference decreases if the α value in- creases and/or h decreases [34]. It is also quite logical to assume that if the mus309 mutations affect the balance by which the double Hol- liday junctions will be resolved as crossovers instead of non-crossovers the m value of the counting model should decrease, and consequently interference should diminish, in the mus309 mutants. The results of the present study are consistent with this idea. It is, therefore, very prob- able that the mus309 mutation affects the Drosophila counting number, thus being the first mutation of this kind identified. Consequently, the results of the present study support the view that crossover interference in Drosophila is tightly tied to genetic distance. In contrast, however, the results of the present study are not compatible with the reaction-diffusion model. According to this model, interference depends on two factors only, viz. the initial density of crossover precur- sors, i.e. DSBs, and the rate of their processing into crossovers. Therefore, it is hard to conceive, in terms of the reaction-diffusion model, how the number of cross- overs, i.e. the map distances, would change due to the effect of temperature but their distances, i.e. interference, would not, as the initial density of DSBs does not chang e. This seems, however, to be the case in the results of the control crosses of the present study. Namely, because the coefficient of coincidence, C, did not change due to the heat shock treatment, it can be concluded that the initial density of the DSBs, i.e. the α value did not increase. Therefore, it cannot be assumed that the α value in the experimental crosses would change either. Thus, if the reaction-diffusion model is correct, h in the experimental crosses should decrease due to the heat shock treatment. This means that the coefficient of coin- cidence, C, should decrease. In fact, however, C in- creased. The results are also in contradiction with any model of crossover interference based on physical distance on the following grounds: The map distances in the experimen- tal and control females are different, and re act diff erently to heat shock, the map distances in the experimental crosses being not heat shock sens itive while the distances in the control crosses are heat shock sensitive. However, the crossover interference is independent of the heat shock in the control crosses, while in the experimental crosses interference is dependent on the heat shock. As explained above, this observation supports the models of interference based on genetic distance. On the other hand, the results are in contradiction with the models based on physical distance. In fact, if interference was dependent on physical distance, how could it change due to heat shock when bo th the genetic map distances and, naturally, the physical distances remain unchanged? 5. ACKNOWLEDGEMENTS Thanks are given to Professor Janos Szabad (Szeged, Hungary) for introducing me to the mus309 gene, and the generous donation of the mutant stocks which, however, are also available from different stock centers. Skilful technical assistance by Mirja Rantanen, M.Sc. is grate- fully acknowledged. REFERENCES [1] Sturtevant, A.H. (1915) The behavior of the chromo- somes as studied through linkage. Zeitschrift für Induc- tive Abstammungs und Vererbungslehre, 13, 234-287. [2] Muller, H.J. (1916) The mechanism of crossing over. American Naturalist, 50, 193-221. doi:10.1086/279534 [3] Hillers, K.J. (2004) Crossover interference. Current Bi- ology, 14, R1036-R1037. doi:10.1016/j.cub.2004.11.038 [4] Foss, E., Lande, R., Stahl, F.W. and Steinberg, C.M. (1993) Chiasma interference as a function of genetic Ed- istance. Genetics, 133, 681-691. [5] Mortimer, R.K. and Fogel, S. (1974) Genetical interfer- ence and gene conversion. In: Grell, R.F., Ed., Mechanims in Recombination, Plenum Press, New York, 263-275. doi:10.1007/978-1-4684-2133-0_23 [6] Portin, P. (2011) Effect of temperature on crossing over in the mus309 mutant, deficient in DNA double-strand break repair, of Drosophila melanogaster suggests a mechanism for crossover interference. Open Journal of Genetics, 1, 38-47. doi:10.4236/ojgen.2011.13008 [7] McKim, K.S. and Hayashi-Hagihara, A. (1998) mei-W68 in Drosophila melanogaster encodes a Spo11 homolog: Evidence that the mechanism for initiating meiotic re- combination is conserved. Genes and Development, 12, 2932-2942. doi:10.1101/gad.12.18.2932 [8] Olsen-Krogh, B. and Symington, L.S. (2004) Recombi- nation proteins in yeast. Annual Reviews of Genetics, 38, 233-271. doi:10.1146/annurev.genet.38.072902.091500 [9] Lorenz, A. and Whitby, M.C. (2006) Crossover promo- tion and prevention. Biochemical Society Transactions, 34, 537-541. doi:10.1042/BST0340537 [10] Heyer, W.-D., Ehmsen, K.T. and Solinger, J.A. (2003) Holliday junctions in eukaryotic nucleus: Resolution in sight? Trends in Biochemical Sciences, 28, 548-557. Copyright © 2012 SciRes. OPEN ACCESS
P. Portin / Open Journal of Genetics 2 (2012) 155-162 Copyright © 2012 SciRes. 162 OPEN ACCESS doi:10.1016/j.tibs.2003.08.011 [11] Heyer, W.-D. (2004) Recombination: Holliday junction resolution and crossover formation. Current Biology, 14, R56-R58. doi:10.1016/j.cub.2003.12.043 [12] Ellis, N.A., Groden, J., Ye, T.-Z., Staughen, J., Lennon, D.J., Ciocci, S., Proytcheva, M. and German, J. (1995) The Bloom’s syndrome gene-product is homologous to RecQ helicases. Cell, 83, 655-666. doi:10.1016/0092-8674(95)90105-1 [13] Karow, J.K., Chakraverty, R.K. and Hickson, J.D. (1997) The Bloom’s syndrome gene product is a 3’-5’ DNA helicase. Journal of Biological Chemistry, 272, 30611- 30614. doi:10.1074/jbc.272.49.30611 [14] Mohaghegh, P., Karow, J.K., Brosh Jr., R.M., Bohr, V.A. and Hickson, I.D. (2001) The Bloom’s and Werner’s syndrome proteins are DNA structure-specific homo- logues. Nucleic Acids Research, 29, 2843-2849. doi:10.1093/nar/29.13.2843 [15] Wu, L., Davies, S.L., Levitt, N.C. and Hickson, I.D. (2001) Potential role for the BLM helicase in recombina- tional repair via a conserved interaction with RAD51. Journal of Biological Chemistry, 276, 19375-19381. doi:10.1074/jbc.M009471200 [16] Brabant, A.J. van Stan, R. and Ellis, N.A. (2000) DNA helicases, genome instability, and human genetic disease. Annual Reviews of Genomics and Human Genetics, 1, 409-459. doi:10.1146/annurev.genom.1.1.409 [17] Adams, M.D., McVey, M. and Sekelsky, J.J. (2003) Drosophila BLM in double-strand break repair by syn- thesis-dependent strand annealing. Science, 299, 265-267. doi:10.1126/science.1077198 [18] Laurencon, A., Orme, C.M., Peters, H.K., Boulton, C.L., Vladar, E.K., Langley, S.A., Bakis, E.P., Harris, D.T., Harris, N.J., Wayson, S.M., Hawley, R.S. and Burtis, K.C. (2004) A large-scale screen for mutagen sensitive loci in Drosophila. Genet ics , 167, 217-231. doi:10.1534/genetics.167.1.217 [19] Portin, P. (2005) mus309 mutation, defective in DNA double-strand break repair, affects intergenic but not in- tragenic meiotic recombination in Drosophila melano- gaster. Genetical Research, 86, 185-191. doi:10.1017/S0016672305007883 [20] Rockmill, B., Fung, J.C., Branda, S.S. and Roeder, G.S. (2003) The Sgs1 helicase regulates chromosome synapsis and meiotic crossing over. Current Biology, 13, 1954- 1962. doi:10.1016/j.cub.2003.10.059 [21] Kusano, K., Johnson-Schlitz, D.M. and Engels, W.R. (2001) Sterility of Drosophila with mutations in the Bloom syndrome gene—Complementation by Ku70. Sci- ence, 291, 2600-2602. doi:10.1126/science.291.5513.2600 [22] Boyd, J.B., Golino, M.D., Shaw, K.E.S., Osgood, C.J. and Green, M.M. (1981) Third-chromosome mutagen- sensitive mutants of Drosophila melanogaster. Genetics, 97, 607-623. [23] Beal, E.L. and Rio, D.C. (1996) Drosophila IRBP/Ku p70 corresponds to the mutagen-sensitive mus309 gene and is involved in P-element excision in vivo. Genes and De- velopment, 10, 921-933. doi:10.1101/gad.10.8.921 [24] Weinstein, A. (1936) The theory of multiple-strand crossing over. Genetics , 21, 155-199. [25] Stevens, W.L. (1936) The analysis of interference. Jour- nal of Genetics, 32, 51-64. doi:10.1007/BF02982501 [26] Grell, R.F. and Chandley, A.C. (1965) Evidence bearing on the coincidence of exchange and DNA replication in the oocyte of Drosophila melanogaster. Proceedings of the National Academy of Sciences USA, 53, 1340-1346. doi:10.1073/pnas.53.6.1340 [27] Grell, R.F. (1972) Recombination and DNA replication in the Drosophila melanogaster oocyte. Genetics, 73, 87- 108. [28] Portin, P. and Suormala, T. (1973) Timing of meiotic crossing-over in Drosophila melanogaster. Hereditas, 75, 267-272. doi:10.1111/j.1601-5223.1973.tb01168.x [29] Mehrotra, S. and McKim, K.S. (2006) Temporal analysis of meiotic DNA double-strand break formation and repair in Drosophila females. Public Library of Sciences Genet- ics, 2, 1883-1897. [30] Joyce, E.F. and McKim, K.S. (2009) Drosophila PCH2 is required for a pachytene checkpoint that monitors dou- ble-strand-break-independent events leading to meiotic crossover formation. Genetics, 181, 39-51. doi:10.1534/genetics.108.093112 [31] Baker, B.S. and Hall, J.C. (1976) Meiotic mutants: Ge- netic control of meiotic recombination and chromosome segregation. In: Ashburner, M. and Novitski, E., Eds., The Genetics and Biology of Drosophila, Vol. 1a, Academic Press, London, 351-434. [32] Sandler, L., Lindsley, D.L., Nicoletti, B. and Trippa, G. (1968) Mutants affecting meiosis in natural populations of Drosophila melanogaster. Genetics, 60, 525-558. [33] Baker, B.S. and Carpenter, A.T.C. (1972) Genetic analy- sis of sex chromosomal meiotic mutants in Drosophila melanogaster. Genetics, 71, 255-286. [34] Fujitani, Y., Mori, S. and Kobayashi, I. (2002) A reac- tion-diffusion model for interference in meiotic crossing over. Geneti cs, 16 1, 365-372.
|